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  1. No Access

    Article

    The tidyomics ecosystem: enhancing omic data analyses

    The growth of omic data presents evolving challenges in data manipulation, analysis and integration. Addressing these challenges, Bioconductor provides an extensive community-driven biological data analysis pl...

    William J. Hutchison, Timothy J. Keyes, Helena L. Crowell in Nature Methods (2024)

  2. No Access

    Article

    Phenotypic, biochemical and genetic diversity of pepper (Capsicum spp.) germplasm reflects selection for cultivar types and spatial distribution

    Throughout the globe morphological, biochemical and genetic variability exists in chilli and is harnessed to achieve specific breeding objectives. In this study, chilli germplasm was characterized based on hor...

    Sayed Azrah Indrabi, Ajaz Malik, Geetika Malik in Plant Biotechnology Reports (2024)

  3. Article

    Open Access

    The effect of inhaler prescription on the development of lung cancer in COPD: a nationwide population-based study

    COPD is associated with the development of lung cancer. A protective effect of inhaled corticosteroids (ICS) on lung cancer is still controversial. Hence, this study investigated the development of lung cancer...

    Ji Eun Park, Eunyoung Lee, Dave Singh, Eun Kyung Kim, Bumhee Park in Respiratory Research (2024)

  4. Article

    Open Access

    Exploration of neuroanatomical characteristics to differentiate prodromal Alzheimer’s disease from cognitively unimpaired amyloid-positive individuals

    Differentiating clinical stages based solely on positive findings from amyloid PET is challenging. We aimed to investigate the neuroanatomical characteristics at the whole-brain level that differentiate prodro...

    Hak Hyeon Kim, Min Jeong Kwon, Sungman Jo, Ji Eun Park, Ji Won Kim in Scientific Reports (2024)

  5. No Access

    Article

    Reducing false positives in deep learning–based brain metastasis detection by using both gradient-echo and spin-echo contrast-enhanced MRI: validation in a multi-center diagnostic cohort

    To develop a deep learning (DL) for detection of brain metastasis (BM) that incorporates both gradient- and turbo spin-echo contrast-enhanced MRI (dual-enhanced DL) and evaluate it in a clinical cohort in comp...

    Suyoung Yun, Ji Eun Park, NakYoung Kim, Seo Young Park, Ho Sung Kim in European Radiology (2024)

  6. No Access

    Article

    Prediction of pseudoprogression in post-treatment glioblastoma using dynamic susceptibility contrast-derived oxygenation and microvascular transit time heterogeneity measures

    To evaluate the added value of MR dynamic susceptibility contrast (DSC)-perfusion-weighted imaging (PWI)-derived tumour microvascular and oxygenation information with cerebral blood volume (CBV) to distinguish...

    Ji Eun Park, Ho Sung Kim, NakYoung Kim, Ronald Borra, Kim Mouridsen in European Radiology (2024)

  7. Article

    Open Access

    Correction: Deep learning-based metastasis detection in patients with lung cancer to enhance reproducibility and reduce workload in brain metastasis screening with MRI: a multi-center study

    Yae Won Park, Ji Eun Park, Sung Soo Ahn, Kyunghwa Han, NakYoung Kim in Cancer Imaging (2024)

  8. Article

    Open Access

    Deep learning-based detection and quantification of brain metastases on black-blood imaging can provide treatment suggestions: a clinical cohort study

    We aimed to evaluate whether deep learning–based detection and quantification of brain metastasis (BM) may suggest treatment options for patients with BMs.

    Hana Jeong, Ji Eun Park, NakYoung Kim, Shin-Kyo Yoon, Ho Sung Kim in European Radiology (2024)

  9. Article

    Open Access

    Deep learning-based metastasis detection in patients with lung cancer to enhance reproducibility and reduce workload in brain metastasis screening with MRI: a multi-center study

    To assess whether a deep learning-based system (DLS) with black-blood imaging for brain metastasis (BM) improves the diagnostic workflow in a multi-center setting.

    Yae Won Park, Ji Eun Park, Sung Soo Ahn, Kyunghwa Han, NakYoung Kim in Cancer Imaging (2024)

  10. No Access

    Article

    The Role of Co** Styles in US Law Enforcement Officer Health and Wellness

    Co** skills have been shown to contribute significantly to law enforcement officers’ ability to manage a variety of personal and professional stressors. Research has identified various co** styles without ...

    Daniel M. Blumberg, Elizabeth A. Mumford in Journal of Police and Criminal Psychology (2024)

  11. No Access

    Article

    Achieving imaging and computational reproducibility on multiparametric MRI radiomics features in brain tumor diagnosis: phantom and clinical validation

    The Image Biomarker Standardization Initiative has helped improve the computational reproducibility of MRI radiomics features. Nonetheless, the MRI sequences and features with high imaging reproducibility are ...

    E.-Nae Cheong, Ji Eun Park, Seo Young Park, Seung Chai Jung in European Radiology (2024)

  12. Article

    Open Access

    Clinical evaluation of noninvasive prenatal testing for sex chromosome aneuploidies in 9,176 Korean pregnant women: a single-center retrospective study

    To evaluate the clinical significance of noninvasive prenatal testing (NIPT) for detecting fetal sex chromosome aneuploidies (SCAs) in Korean pregnant women.

    Hyun** Kim, Ji Eun Park, Kyung Min Kang, Hee Yeon Jang in BMC Pregnancy and Childbirth (2024)

  13. Article

    Open Access

    Author Correction: Application of deep learning technology for temporal analysis of videofluoroscopic swallowing studies

    Seong Yun Jeong, Jeong Min Kim, Ji Eun Park, Seung Jun Baek in Scientific Reports (2024)

  14. Article

    Open Access

    Quantitative Analysis of Temporal Parameters Correlated with Aspiration and Lesion Location in Stroke Patients

    The purpose of this study was to identify differences in temporal parameters correlating to the presence of aspiration and the severity of penetration-aspiration scale (PAS) in patients with dysphagia after st...

    Jeong Min Kim, Ji Eun Park, Seung Jun Baek, Seung Nam Yang in Dysphagia (2023)

  15. No Access

    Article

    Natural language processing to predict isocitrate dehydrogenase genotype in diffuse glioma using MR radiology reports

    To evaluate the performance of natural language processing (NLP) models to predict isocitrate dehydrogenase (IDH) mutation status in diffuse glioma using routine MR radiology reports.

    Minjae Kim, Kai Tzu-iunn Ong, Seonah Choi, **young Yeo, Sooyon Kim in European Radiology (2023)

  16. No Access

    Article

    Aquaporin-4 Deficiency is Associated with Cognitive Impairment and Alterations in astrocyte-neuron Lactate Shuttle

    Cognitive impairment refers to notable declines in cognitive abilities including memory, language, and emotional stability leading to the inability to accomplish essential activities of daily living. Astrocyte...

    Hyeuk Cha, Jun Ho Choi, Hanwool Jeon, Jae Hyun Kim, Moinay Kim in Molecular Neurobiology (2023)

  17. Article

    Open Access

    Prognostic utility of body composition parameters based on computed tomography analysis of advanced non-small cell lung cancer treated with immune checkpoint inhibitors

    The purpose of this study was to evaluate the prognostic impact of body composition parameters based on computed tomography (CT) in patients with non-small cell lung cancer (NSCLC) who received ICI treatment.

    Ji Eun Park, Jaemin Jo, Jeonghwan Youk, Miso Kim, Soon Ho Yoon in Insights into Imaging (2023)

  18. Article

    Open Access

    Prognostic value of MRI volumetric parameters in non-small cell lung cancer patients after immune checkpoint inhibitor therapy: comparison with response assessment criteria

    Accurate response parameters are important for patients with brain metastasis (BM) undergoing clinical trials using immunotherapy, considering poorly defined enhancement and variable responses. This study inve...

    Yun Hwa Roh, Ji Eun Park, Sora Kang, Shinkyo Yoon, Sang-We Kim in Cancer Imaging (2023)

  19. Article

    Open Access

    Application of deep learning technology for temporal analysis of videofluoroscopic swallowing studies

    Temporal parameters during swallowing are analyzed for objective and quantitative evaluation of videofluoroscopic swallowing studies (VFSS). Manual analysis by clinicians is time-consuming, complicated and pro...

    Seong Yun Jeong, Jeong Min Kim, Ji Eun Park, Seung Jun Baek in Scientific Reports (2023)

  20. No Access

    Article

    Defining subventricular zone involvement to predict the survival of patients in isocitrate dehydrogenase-wild type glioblastoma: validation in a prospective registry

    The prognostic value of subventricular zone distance (SVD) is unclear because of different definitions and lack of evaluation of clinical survival models. The aim of this study was to define SVD and evaluate i...

    Ji Eun Kim, Ji Eun Park, Seo Young Park, Young-Hoon Kim in European Radiology (2023)

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