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  1. Article

    Open Access

    Integration of Hi-C with short and long-read genome sequencing reveals the structure of germline rearranged genomes

    Structural variants are a common cause of disease and contribute to a large extent to inter-individual variability, but their detection and interpretation remain a challenge. Here, we investigate 11 individual...

    Robert Schöpflin, Uirá Souto Melo, Hossein Moeinzadeh in Nature Communications (2022)

  2. Article

    Open Access

    TADA—a machine learning tool for functional annotation-based prioritisation of pathogenic CNVs

    Few methods have been developed to investigate copy number variants (CNVs) based on their predicted pathogenicity. We introduce TADA, a method to prioritise pathogenic CNVs through assisted manual filtering an...

    Jakob Hertzberg, Stefan Mundlos, Martin Vingron, Giuseppe Gallone in Genome Biology (2022)

  3. Article

    Open Access

    Genome sequencing in families with congenital limb malformations

    The extensive clinical and genetic heterogeneity of congenital limb malformation calls for comprehensive genome-wide analysis of genetic variation. Genome sequencing (GS) has the potential to identify all gene...

    Jonas Elsner, Martin A. Mensah, Manuel Holtgrewe, Jakob Hertzberg in Human Genetics (2021)