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  1. Article

    Open Access

    The importance of heteroresistance and efflux pumps in bedaquiline-resistant Mycobacterium tuberculosis isolates from Iran

    Tuberculosis (TB) continues to pose a threat to communities worldwide and remains a significant public health issue in several countries. We assessed the role of heteroresistance and efflux pumps in bedaquilin...

    Nahid Madadi-Goli, Kamal Ahmadi in Annals of Clinical Microbiology and Antimi… (2024)

  2. Article

    Open Access

    Tuberculosis prevention, diagnosis, and treatment financial profile during 2006–2021: PART A

    Tuberculosis (TB) is a communicable disease that is a major cause of death and one of the leading causes of death worldwide. Currently, there is no analyzed data to examine the financial profile of TB by count...

    Maryam Meskini, Nahid Madadi, Kamal Ahmadi in Cost Effectiveness and Resource Allocation (2023)

  3. Article

    Open Access

    Mixed pulmonary infection with four isolates of nontuberculous mycobacteria: a case report of mycobacterium bacteremicum infection

    A mixed pulmonary infection of Mycobacterium bacteremicum and three different isolates of nontuberculous mycobacteria (NTM) is an unusual clinical manifestation and have not yet been indicated. In this case repor...

    Morteza Masoumi, Fatemeh Sakhaee, Mohammad Reza Zolfaghari, Samira Tarashi in Pneumonia (2022)

  4. Article

    Open Access

    Identification of a novel fully human anti-toxic shock syndrome toxin (TSST)-1 single-chain variable fragment antibody averting TSST-1-induced mitogenesis and cytokine secretion

    Staphylococcal superantigens are virulence factors that help the pathogen escape the immune system and develop an infection. Toxic shock syndrome toxin (TSST)-1 is one of the most studied superantigens whose r...

    Mahdieh Soezi, Somayeh Piri-Gavgani, Mostafa Ghanei, Mir Davood Omrani in BMC Biotechnology (2022)

  5. Article

    Correlation between Legionella pneumophila serogroups isolated from patients with ventilator-associated pneumonia and water resources: a study of four hospitals in Tehran, Iran

    Legionella pneumophila (L. pneumophila) is one of the main pathogens, causing pneumonia and respiratory tract infections, especially in patients with ventilator-associated pneumonia (VAP). This study aimed to app...

    Fatemeh Sakhaee, Shirin Mafi, Mohsen Zargar in Environmental Science and Pollution Resear… (2022)

  6. Article

    Open Access

    Detection of Mimivirus from respiratory samples in tuberculosis-suspected patients

    Acanthamoeba polyphaga mimivirus (APMV), a species of amoeba-infecting giant viruses, has recently emerged as human respiratory pathogens. This study aimed to evaluate the presence of Mimivirus in respiratory ...

    Fatemeh Sakhaee, Jalal Mosayebi Amroabadi, Sara Razi, Farzam Vaziri in Scientific Reports (2022)

  7. Article

    Open Access

    The anti-inflammatory effects of Akkermansia muciniphila and its derivates in HFD/CCL4-induced murine model of liver injury

    Inflammation plays a critical role in the promotion of hepatocyte damage and liver fibrosis. In recent years the protective role of Akkermansia muciniphila, a next-generation beneficial microbe, has been suggeste...

    Shahrbanoo Keshavarz Azizi Raftar, Fatemeh Ashrafian in Scientific Reports (2022)

  8. Article

    Open Access

    Extracellular vesicles and pasteurized cells derived from Akkermansia muciniphila protect against high-fat induced obesity in mice

    Several studies have shown that probiotics have beneficial effects on weight control and metabolic health. In addition to probiotics, recent studies have investigated the effects of paraprobiotics and postbiot...

    Fatemeh Ashrafian, Shahrbanoo Keshavarz Azizi Raftar in Microbial Cell Factories (2021)

  9. No Access

    Article

    Effect of Akkermansia muciniphila, Faecalibacterium prausnitzii, and Their Extracellular Vesicles on the Serotonin System in Intestinal Epithelial Cells

    The gastrointestinal (GI) tract is an essential reservoir of serotonin or 5-hydroxytryptamine (5-HT), which possesses a set of bacterial species communities. Intestinal microbiota has the ability to modulate t...

    Rezvan Yaghoubfar, Ava Behrouzi in Probiotics and Antimicrobial Proteins (2021)

  10. Article

    Open Access

    Evidencing the presence of merkel cell polyomavirus in papillary thyroid cancer

    Merkel cell polyomavirus (MCPyV) infects most people asymptomatically, but recent reports indicate that the virus may be related to carcinogenesis. This study aimed to evaluate the impact of MCPyV on the devel...

    Monir Ghanghareh, Jalal Mosayebi Amroabadi, Seyed Mohammad Tavangar in Scientific Reports (2021)

  11. Article

    Open Access

    Comparative effects of alive and pasteurized Akkermansia muciniphila on normal diet-fed mice

    Recently, Akkermansia muciniphila an anaerobic member of the gut microbiota, has been proposed as a next-generation probiotic. The aim of this study was evaluation of the effect of alive and pasteurized A. mucini...

    Fatemeh Ashrafian, Shahrbanoo Keshavarz Azizi Raftar in Scientific Reports (2021)

  12. No Access

    Article

    Effects of Akkermansia muciniphila and Faecalibacterium prausnitzii on serotonin transporter expression in intestinal epithelial cells

    The highest level of peripheral serotonin in the body can be found in the gastrointestinal (GI) tract as its reservoir. There is complete interaction between human gastrointestinal microbiota and serotonin sys...

    Rezvan Yaghoubfar, Ava Behrouzi in Journal of Diabetes & Metabolic Disorders (2021)

  13. No Access

    Article

    The Anti-fibrotic Effects of Heat-Killed Akkermansia muciniphila MucT on Liver Fibrosis Markers and Activation of Hepatic Stellate Cells

    Hepatic stellate cell (HSC) activation is a key phenomenon in development of liver fibrosis. Recently, Akkermansia muciniphila has been introduced as a next-generation microbe residing in the mucosal layer of the...

    Shahrbanoo Keshavarz Azizi Raftar in Probiotics and Antimicrobial Proteins (2021)

  14. Article

    Open Access

    Strain-specific behavior of Mycobacterium tuberculosis in A549 lung cancer cell line

    A growing body of evidence has shown the association between tuberculosis (TB) infection and lung cancer. However, the possible effect of strain‐specific behavior of Mycobacterium tuberculosis (M.tb) population, ...

    Shima Hadifar, Shayan Mostafaei, Ava Behrouzi, Abolfazl Fateh in BMC Bioinformatics (2021)

  15. Article

    Open Access

    Variation in Mycobacterium tuberculosis population structure in Iran: a systemic review and meta-analysis

    Acquiring comprehensive insight into the dynamics of Mycobacterium tuberculosis (Mtb) population structure is an essential step to adopt effective tuberculosis (TB) control strategies and improve therapeutic meth...

    Shima Hadifar, Abolfazl Fateh, Vahid Pourbarkhordar in BMC Infectious Diseases (2021)

  16. Article

    Open Access

    Modulation of serotonin signaling/metabolism by Akkermansia muciniphila and its extracellular vesicles through the gut-brain axis in mice

    Several studies have reported that the host-microbe interactions in the gut modulate the host serotonin or 5-hydroxytryptamine (5-HT) system. Here, we evaluated the effects of Akkermansia muciniphila and its extr...

    Rezvan Yaghoubfar, Ava Behrouzi, Fatemeh Ashrafian, Arefeh Shahryari in Scientific Reports (2020)

  17. No Access

    Article

    The effect of Faecalibacterium prausnitzii and its extracellular vesicles on the permeability of intestinal epithelial cells and expression of PPARs and ANGPTL4 in the Caco-2 cell culture model

    Gut microbiota such as Faecalibacterium prausnitzii play a major role in the regulation of gut barrier, inflammation and metabolic functions. Microbiota–derived extracellular vehicles (EVs) have been recently int...

    Seyedeh Marzieh Moosavi, Abbas Akhavan Sepahi in Journal of Diabetes & Metabolic Disorders (2020)

  18. Article

    Open Access

    A case report of wrist synovial infection due to Mycobacterium jacuzzii, Iran

    Mycobacterium jacuzzii (M. jacuzzii) was first isolated in 2003 by insertion of breast implants in Tel Aviv, Israel. In this case report, we describe our experience in detection of M. jacuzzii using phenotypic an...

    Fatemeh Sakhaee, Morteza Masoumi, Farzam Vaziri in BMC Infectious Diseases (2020)

  19. No Access

    Article

    Main gut bacterial composition differs between patients with type 1 and type 2 diabetes and non-diabetic adults

    Regarding the role of gut microbial dysbiosis in hyperglycemia, we aimed to compare the main gut bacterial composition among type 1 and type 2 diabetic patients and healthy non-diabetic adults.

    Hanieh-Sadat Ejtahed, Zahra Hoseini-Tavassol in Journal of Diabetes & Metabolic Disorders (2020)

  20. No Access

    Article

    Stimulatory effects of Lactobacillus casei derived extracellular vesicles on toll-like receptor 9 gene expression and cytokine profile in human intestinal epithelial cells

    A complex community of microorganisms in the gastrointestinal (GI) tract, known as the gut microbiota, exerts major effects on gene expression and cytokine profile. Extracellular vesicles (EVs) which are produ...

    Maryam Ebrahimi Vargoorani in Journal of Diabetes & Metabolic Disorders (2020)

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