Skip to main content

and
  1. Article

    Open Access

    Host factors are associated with vaginal microbiome structure in pregnancy in the ECHO Cohort Consortium

    Using pooled vaginal microbiota data from pregnancy cohorts (N = 683 participants) in the Environmental influences on Child Health Outcomes (ECHO) Program, we analyzed 16S rRNA gene amplicon sequences to ident...

    Kimberly McKee, Christine M. Bassis, Jonathan Golob in Scientific Reports (2024)

  2. Article

    Open Access

    Microbial community structure and composition is associated with host species and sex in Sigmodon cotton rats

    The cotton rat (genus Sigmodon) is an essential small animal model for the study of human infectious disease and viral therapeutic development. However, the impact of the host microbiome on infection outcomes has...

    Britton A. Strickland, Mira C. Patel, Meghan H. Shilts, Helen H. Boone in Animal Microbiome (2021)

  3. Article

    Open Access

    Evaluation of the upper airway microbiome and immune response with nasal epithelial lining fluid absorption and nasal washes

    Despite being commonly used to collect upper airway epithelial lining fluid, nasal washes are poorly reproducible, not suitable for serial sampling, and limited by a dilution effect. In contrast, nasal filters...

    Meghan H. Shilts, Christian Rosas-Salazar, Christian E. Lynch in Scientific Reports (2020)

  4. Article

    Open Access

    Respiratory Syncytial Virus whole-genome sequencing identifies convergent evolution of sequence duplication in the C-terminus of the G gene

    Respiratory Syncytial Virus (RSV) is responsible for considerable morbidity and mortality worldwide and is the most important respiratory viral pathogen in infants. Extensive sequence variability within and be...

    Seth A. Schobel, Karla M. Stucker, Martin L. Moore, Larry J. Anderson in Scientific Reports (2016)

  5. No Access

    Article

    Minimally Invasive Sampling Method Identifies Differences in Taxonomic Richness of Nasal Microbiomes in Young Infants Associated with Mode of Delivery

    To date, there is a limited understanding of the role of the airway microbiome in the early life development of respiratory diseases such as asthma, partly due to a lack of simple and minimally invasive sample...

    Meghan H. Shilts, Christian Rosas-Salazar, Andrey Tovchigrechko in Microbial Ecology (2016)

  6. Article

    Open Access

    Objectives, design and enrollment results from the Infant Susceptibility to Pulmonary Infections and Asthma Following RSV Exposure Study (INSPIRE)

    Respiratory syncytial virus (RSV) lower respiratory tract infection (LRI) during infancy has been consistently associated with an increased risk of childhood asthma. In addition, evidence supports that this re...

    Emma K Larkin, Tebeb Gebretsadik, Martin L Moore in BMC Pulmonary Medicine (2015)