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Open AccessProtein folding prediction in the HP model using ions motion optimization with a greedy algorithm
The function of a protein is determined by its native protein structure. Among many protein prediction methods, the Hydrophobic-Polar (HP) model, an ab initio method, simplifies the protein folding prediction ...
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Open AccessConfronting two-pair primer design for enzyme-free SNP genoty** based on a genetic algorithm
Polymerase chain reaction with confronting two-pair primers (PCR-CTPP) method produces allele-specific DNA bands of different lengths by adding four designed primers and it achieves the single nucleotide polym...
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Open AccessSNP-RFL** 2: an updated and integrated PCR-RFLP tool for SNP genoty**
PCR-restriction fragment length polymorphism (RFLP) assay is a cost-effective method for SNP genoty** and mutation detection, but the manual mining for restriction enzyme sites is challenging and cumbersome....
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Open AccessV-MitoSNP: visualization of human mitochondrial SNPs
Mitochondrial single nucleotide polymorphisms (mtSNPs) constitute important data when trying to shed some light on human diseases and cancers. Unfortunately, providing relevant mtSNP genoty** information in ...