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  1. No Access

    Article

    Exploiting genomic tools for genetic dissection and improving the resistance to Fusarium stalk rot in tropical maize

    A stable genomic region conferring FSR resistance at ~250 Mb on chromosome 1 was identified by GWAS. Genomic prediction has the potential to improve FSR resistance.

    Junqiao Song, Yubo Liu, Rui Guo, Angela Pacheco in Theoretical and Applied Genetics (2024)

  2. Article

    Open Access

    Sustainable management of transboundary pests requires holistic and inclusive solutions

    Globalization and changing climates are aggravating the occurrence and impacts of transboundary pests, and driving the emergence of new threats. Most of the low- and middle-income countries in Africa, Asia and...

    Boddupalli M. Prasanna, Monica Carvajal-Yepes, P. Lava Kumar in Food Security (2022)

  3. Article

    Open Access

    Genetic trends in CIMMYT’s tropical maize breeding pipelines

    Fostering a culture of continuous improvement through regular monitoring of genetic trends in breeding pipelines is essential to improve efficiency and increase accountability. This is the first global study t...

    Boddupalli M. Prasanna, Juan Burgueño, Yoseph Beyene, Dan Makumbi in Scientific Reports (2022)

  4. Article

    Open Access

    Host plant resistance for fall armyworm management in maize: relevance, status and prospects in Africa and Asia

    Sustainable control of fall armyworm (FAW) requires implementation of effective integrated pest management (IPM) strategies, with host plant resistance as a key component. Significant opportunities exist for d...

    Boddupalli M. Prasanna, Anani Bruce, Yoseph Beyene in Theoretical and Applied Genetics (2022)

  5. Article

    Open Access

    Identification and fine map** of a major QTL (qRtsc8-1) conferring resistance to maize tar spot complex and validation of production markers in breeding lines

    A major QTL of qRtsc8-1 conferring TSC resistance was identified and fine mapped to a 721 kb region on chromosome 8 at 81 Mb, and production markers were v...

    Jiaojiao Ren, Penghao Wu, Gordon M. Huestis, Ao Zhang in Theoretical and Applied Genetics (2022)

  6. Article

    Open Access

    Beat the stress: breeding for climate resilience in maize for the tropical rainfed environments

    Intensive public sector breeding efforts and public-private partnerships have led to the increase in genetic gains, and deployment of elite climate-resilient maize cultivars for the stress-prone environments ...

    Boddupalli M. Prasanna, Jill E. Cairns, P. H. Zaidi in Theoretical and Applied Genetics (2021)

  7. Article

    Open Access

    Genetic dissection of Striga hermonthica (Del.) Benth. resistance via genome-wide association and genomic prediction in tropical maize germplasm

    Genome-wide association revealed that resistance to Striga hermonthica is influenced by multiple genomic regions with moderate effects. It is possible to increase genetic gains from selection for Striga resistanc...

    Manje Gowda, Dan Makumbi, Biswanath Das in Theoretical and Applied Genetics (2021)

  8. Article

    Open Access

    Maximizing efficiency of genomic selection in CIMMYT’s tropical maize breeding program

    Historical data from breeding programs can be efficiently used to improve genomic selection accuracy, especially when the training set is optimized to subset individuals most informative of the target testing ...

    Sikiru Adeniyi Atanda, Michael Olsen, Juan Burgueño in Theoretical and Applied Genetics (2021)

  9. Article

    Open Access

    Applications of genoty**-by-sequencing (GBS) in maize genetics and breeding

    Genoty**-by-Sequencing (GBS) is a low-cost, high-throughput genoty** method that relies on restriction enzymes to reduce genome complexity. GBS is being widely used for various genetic and breeding applica...

    Nan Wang, Yibing Yuan, Hui Wang, Diansi Yu, Yubo Liu, Ao Zhang in Scientific Reports (2020)

  10. Article

    Open Access

    Genomic prediction across years in a maize doubled haploid breeding program to accelerate early-stage testcross testing

    Genomic selection with a multiple-year training population dataset could accelerate early-stage testcross testing by skip** the first-stage yield testing, which significantly saves the time a...

    Nan Wang, Hui Wang, Ao Zhang, Yubo Liu, Diansi Yu in Theoretical and Applied Genetics (2020)

  11. Article

    Open Access

    Molecular diversity and selective sweeps in maize inbred lines adapted to African highlands

    Little is known on maize germplasm adapted to the African highland agro-ecologies. In this study, we analyzed high-density genoty** by sequencing (GBS) data of 298 African highland adapted maize inbred lines...

    Dagne Wegary, Adefris Teklewold, Boddupalli M. Prasanna in Scientific Reports (2019)

  12. Article

    Open Access

    Genetic architecture of maize chlorotic mottle virus and maize lethal necrosis through GWAS, linkage analysis and genomic prediction in tropical maize germplasm

    Analysis of the genetic architecture of MCMV and MLN resistance in maize doubled-haploid populations revealed QTLs with major effects on chromosomes 3 and 6 that were consistent across genetic backgrounds and ...

    Chelang’at Sitonik, L. M. Suresh, Yoseph Beyene in Theoretical and Applied Genetics (2019)

  13. Article

    Open Access

    Discovery and validation of genomic regions associated with resistance to maize lethal necrosis in four biparental populations

    In sub-Saharan Africa, maize is the key determinant of food security for smallholder farmers. The sudden outbreak of maize lethal necrosis (MLN) disease is seriously threatening the maize production in the reg...

    Manje Gowda, Yoseph Beyene, Dan Makumbi, Kassa Semagn in Molecular Breeding (2018)

  14. No Access

    Article

    Marker-assisted introgression of opaque2 allele for rapid conversion of elite hybrids into quality protein maize

    Maize is a valuable source of food and feed worldwide. Maize endosperm protein is, however nutritionally poor due to the reduced levels of two essential amino acids, lysine and tryptophan. In this study, reces...

    Firoz Hossain, Vignesh Muthusamy, Neha Pandey, Ashish K. Vishwakarma in Journal of Genetics (2018)

  15. Article

    Open Access

    Genetic analysis of tropical maize inbred lines for resistance to maize lethal necrosis disease

    Maize lethal necrosis (MLN) disease is a recent outbreak in eastern Africa and has emerged as a significant threat to maize production in the region. The disease is caused by the co-infection of Maize chloroti...

    Yoseph Beyene, Manje Gowda, L. M. Suresh, Stephen Mugo, Michael Olsen in Euphytica (2017)

  16. Article

    Open Access

    Grain yield performance and flowering synchrony of CIMMYT’s tropical maize (Zea mays L.) parental inbred lines and single crosses

    Maize production constraints in sub-Saharan Africa (SSA) are being addressed by CIMMYT and partners through an array of projects, focusing on develo** and evaluating parental inbred lines and single-crosses ...

    Mosisa Worku, Dan Makumbi, Yoseph Beyene, Biswanath Das, Stephen Mugo in Euphytica (2016)

  17. Article

    Open Access

    Molecular characterization of CIMMYT maize inbred lines with genoty**-by-sequencing SNPs

    Molecular characterization information on genetic diversity, population structure and genetic relationships provided by this research will help maize breeders to better understand how to utiliz...

    Yongsheng Wu, Felix San Vicente, Kaijian Huang in Theoretical and Applied Genetics (2016)

  18. Article

    Open Access

    Performance and grain yield stability of maize populations developed using marker-assisted recurrent selection and pedigree selection procedures

    A marker-assisted recurrent selection (MARS) program was undertaken in sub-Saharan Africa to improve grain yield under drought-stress in 10 biparental tropical maize populations. The objectives of the present ...

    Yoseph Beyene, Kassa Semagn, Stephen Mugo, Boddupalli M. Prasanna in Euphytica (2016)

  19. Article

    Open Access

    Genome-wide association and genomic prediction of resistance to maize lethal necrosis disease in tropical maize germplasm

    Genome-wide association analysis in tropical and subtropical maize germplasm revealed that MLND resistance is influenced by multiple genomic regions with sma...

    Manje Gowda, Biswanath Das, Dan Makumbi, Raman Babu in Theoretical and Applied Genetics (2015)

  20. Article

    Open Access

    Molecular map** across three populations reveals a QTL hotspot region on chromosome 3 for secondary traits associated with drought tolerance in tropical maize

    Identifying quantitative trait loci (QTL) of sizeable effects that are expressed in diverse genetic backgrounds across contrasting water regimes particularly for secondary traits can significantly complement t...

    Gustavo Dias Almeida, Sudha Nair, Aluízio Borém, Jill Cairns in Molecular Breeding (2014)

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