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  1. Article

    Inferring the distribution of fitness effects in patient-sampled and experimental virus populations: two case studies

    We here propose an analysis pipeline for inferring the distribution of fitness effects (DFE) from either patient-sampled or experimentally-evolved viral populations, that explicitly accounts for non-Wright-Fis...

    Ana Y. Morales-Arce, Parul Johri, Jeffrey D. Jensen in Heredity (2022)

  2. No Access

    Article

    Ethics of DNA research on human remains: five globally applicable guidelines

    We are a group of archaeologists, anthropologists, curators and geneticists representing diverse global communities and 31 countries. All of us met in a virtual workshop dedicated to ethics in ancient DNA rese...

    Songül Alpaslan-Roodenberg, David Anthony, Hiba Babiker, Eszter Bánffy in Nature (2021)

  3. No Access

    Article

    The population genomics of within-host Mycobacterium tuberculosis

    Recent progress in genomic sequencing from patient samples has allowed for the first detailed insight into the within-host genetic diversity of Mycobacterium tuberculosis (M.TB), revealing remarkably low levels o...

    Ana Y. Morales-Arce, Susanna J. Sabin, Anne C. Stone, Jeffrey D. Jensen in Heredity (2021)

  4. No Access

    Article

    Ancient mitochondrial DNA and population dynamics in postclassic Central Mexico: Tlatelolco (ad 1325–1520) and Cholula (ad 900–1350)

    The past composition and genetic diversity of populations from Central Mexico during the Postclassic period (ad 900–1520) are still little understood. Two of the largest centres of ancient groups, Tlatelolco and ...

    Ana Y. Morales-Arce, Geoffrey McCafferty in Archaeological and Anthropological Sciences (2019)

  5. Article

    Open Access

    Successful reconstruction of whole mitochondrial genomes from ancient Central America and Mexico

    The northern and southern peripheries of ancient Mesoamerica are poorly understood. There has been speculation over whether borderland cultures such as Greater Nicoya and Casas Grandes represent Mesoamerican o...

    Ana Y. Morales-Arce, Courtney A. Hofman, Ana T. Duggan in Scientific Reports (2017)