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  1. No Access

    Article

    Microbe-induced phenotypic variation leads to overyielding in clonal plant populations

    Overyielding, the high productivity of multispecies plant communities, is commonly seen as the result of plant genetic diversity. Here we demonstrate that biodiversity–ecosystem functioning relationships can e...

    Waseem Raza, Gaofei Jiang, Nico Eisenhauer, Yishuo Huang in Nature Ecology & Evolution (2024)

  2. Article

    Open Access

    Effects of plant tissue permeability on invasion and population bottlenecks of a phytopathogen

    Pathogen genetic diversity varies in response to environmental changes. However, it remains unclear whether plant barriers to invasion could be considered a genetic bottleneck for phytopathogen populations. He...

    Gaofei Jiang, Yuling Zhang, Min Chen, Josep Ramoneda in Nature Communications (2024)

  3. Article

    Coming of age for the rhizosphere microbiome transplantation

    Microbiome transplants have the potential to disrupt agriculture and medicine by transferring the microbial genetic pool (and hence capabilities) from one host to another. Yet, for this technology to become re...

    Alexandre Jousset, Seon-Woo Lee in Soil Ecology Letters (2023)

  4. No Access

    Chapter

    Microbiome and Plant Nutritional Value: Current Knowledge and Management

    Nutrient deficiencies are a major issue worldwide. Microorganisms can affect plant nutrition and may form the backbone of fortification strategies ensuring high nutritional values of grains and vegetables. How...

    Alexandre Jousset in Microbial Biofertilizers and Micronutrient… (2022)

  5. Article

    Open Access

    Rapid evolution of bacterial mutualism in the plant rhizosphere

    While beneficial plant-microbe interactions are common in nature, direct evidence for the evolution of bacterial mutualism is scarce. Here we use experimental evolution to causally show that initially plant-an...

    Erqin Li, Ronnie de Jonge, Chen Liu, Henan Jiang in Nature Communications (2021)

  6. No Access

    Article

    Competition for iron drives phytopathogen control by natural rhizosphere microbiomes

    Plant pathogenic bacteria cause high crop and economic losses to human societies13. Infections by such pathogens are challenging to control as they often arise through complex interactions between plants, pathog...

    Shaohua Gu, Zhong Wei, Zhengying Shao, Ville-Petri Friman, Kehao Cao in Nature Microbiology (2020)

  7. Article

    Open Access

    Rhizosphere protists are key determinants of plant health

    Plant health is intimately influenced by the rhizosphere microbiome, a complex assembly of organisms that changes markedly across plant growth. However, most rhizosphere microbiome research has focused on frac...

    Wu **ong, Yuqi Song, Keming Yang, Yian Gu, Zhong Wei, George A. Kowalchuk in Microbiome (2020)

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    Article

    Phage combination therapies for bacterial wilt disease in tomato

    Bacteriophages have been proposed as an alternative to pesticides to kill bacterial pathogens of crops. However, the efficacy of phage biocontrol is variable and poorly understood in natural rhizosphere microb...

    **aofang Wang, Zhong Wei, Keming Yang, Jianing Wang in Nature Biotechnology (2019)

  9. Article

    Open Access

    Elevated tropospheric CO2 and O3 concentrations impair organic pollutant removal from grassland soil

    The concentrations of tropospheric CO2 and O3 have been rising due to human activities. These rising concentrations may have strong impacts on soil functions as changes in plant physiology may lead to altered pla...

    Fuxun Ai, Nico Eisenhauer, Alexandre Jousset, Olaf Butenschoen in Scientific Reports (2018)

  10. Article

    Open Access

    Microbial modulation of plant ethylene signaling: ecological and evolutionary consequences

    The plant hormone ethylene is one of the central regulators of plant development and stress resistance. Optimal ethylene signaling is essential for plant fitness and is under strong selection pressure. Plants ...

    Mohammadhossein Ravanbakhsh, Rashmi Sasidharan, Laurentius A. C. J. Voesenek in Microbiome (2018)

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    Article

    Application of biochar reduces Ralstonia solanacearum infection via effects on pathogen chemotaxis, swarming motility, and root exudate adsorption

    We evaluated the efficacy of biochar application for suppressing bacterial wilt of tomato and identified the potential underlying mechanisms involved in the disease control.

    Yian Gu, Yugang Hou, Dapeng Huang, Zhexia Hao, **aofang Wang, Zhong Wei in Plant and Soil (2017)

  12. No Access

    Chapter

    Application of Protists to Improve Plant Growth in Sustainable Agriculture

    Plant health and growth are largely dependent on root-associated microbiota. Several bacteria and fungi can provide important services to plants, such as nutrient mineralization or protection against diseases....

    Alexandre Jousset in Rhizotrophs: Plant Growth Promotion to Bioremediation (2017)

  13. Article

    Open Access

    Protozoa stimulate the plant beneficial activity of rhizospheric pseudomonads

    The functioning of plant-associated bacteria is strongly influenced by their interaction with other organisms. For instance, bacteria upregulate the production of secondary metabolites in presence of protozoa ...

    Simone Weidner, Ellen Latz, Betina Agaras, Claudio Valverde in Plant and Soil (2017)

  14. No Access

    Article

    Pathogen invasion indirectly changes the composition of soil microbiome via shifts in root exudation profile

    Plant-derived root exudates modulate plant-microbe interactions and may play an important role in pathogen suppression. Root exudates may, for instance, directly inhibit pathogens or alter microbiome compositi...

    Yian Gu, Zhong Wei, Xueqi Wang, Ville-Petri Friman in Biology and Fertility of Soils (2016)

  15. Article

    Open Access

    Unravelling Linkages between Plant Community Composition and the Pathogen-Suppressive Potential of Soils

    Plant diseases cause dramatic yield losses worldwide. Current disease control practices can be deleterious for the environment and human health, calling for alternative and sustainable management regimes. Soil...

    Ellen Latz, Nico Eisenhauer, Björn Christian Rall, Stefan Scheu in Scientific Reports (2016)

  16. Article

    Open Access

    Trophic network architecture of root-associated bacterial communities determines pathogen invasion and plant health

    Host-associated bacterial communities can function as an important line of defence against pathogens in animals and plants. Empirical evidence and theoretical predictions suggest that species-rich communities ...

    Zhong Wei, Tianjie Yang, Ville-Petri Friman, Yangchun Xu in Nature Communications (2015)

  17. No Access

    Article

    Ecological stability in response to warming

    Although many species-level responses to climate warming have been documented, understanding of ecosystem-level stability under warming remains low. Now, a study using meta-analyses of temperature effects on m...

    Katarina E. Fussmann, Florian Schwarzmüller, Ulrich Brose in Nature Climate Change (2014)

  18. No Access

    Article

    Evolutionary history predicts the stability of cooperation in microbial communities

    Cooperation fundamentally contributes to the success of life on earth, but its persistence in diverse communities remains a riddle, as selfish phenotypes rapidly evolve and may spread until disrupting cooperat...

    Alexandre Jousset, Nico Eisenhauer, Eva Materne, Stefan Scheu in Nature Communications (2013)

  19. Article

    Open Access

    Secondary Metabolites of Pseudomonas fluorescens CHA0 Drive Complex Non-Trophic Interactions with Bacterivorous Nematodes

    Non-trophic interactions are increasingly recognised as a key parameter of predator–prey interactions. In soil, predation by bacterivorous nematodes is a major selective pressure sha** soil bacterial communi...

    Nina Neidig, Rüdiger J. Paul, Stefan Scheu, Alexandre Jousset in Microbial Ecology (2011)