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Article
Open AccessGenome-wide association analysis and validation with KASP markers for nut and shell traits in almond (Prunus dulcis [Mill.] D.A.Webb)
Almond shell hardness is an economically important quality trait that protects the integrity of the kernel. It is directly related with shelling or crack-out percent. In the U.S. and Australian markets, soft t...
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Article
The delay of flowering time in almond: a review of the combined effect of adaptation, mutation and breeding
Regulation of flowering time in almond, as in other Prunus species, is a complex process involving both chill and heat requirements. Following exposure to appropriate consecutive periods of cold and warm temperat...
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Article
Open AccessGenome-wide DNA-(de)methylation is associated with Noninfectious Bud-failure exhibition in Almond (Prunus dulcis [Mill.] D.A.Webb)
Noninfectious bud-failure (BF) remains a major threat to almond production in California, particularly with the recent rapid expansion of acreage and as more intensive cultural practices and modern cultivars a...
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Article
QTL map** and breeding value estimation through pedigree-based analysis of fruit size and weight in four diverse peach breeding programs
The narrow genetic base of peach (Prunus persica L. Batsch) challenges efforts to accurately dissect the genetic architecture of complex traits. Standardized phenotypic assessment of pedigree-linked breeding germ...
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Article
QTL map** of pomological traits in peach and related species breeding germplasm
Peach is an economically important fruit tree crop that exhibits high phenotypic variability yet suffers from diversity-limited gene pool. Genetic introgression of novel alleles from related species is being p...
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Article
Methylation of the S f locus in almond is associated with S-RNase loss of function
Self-compatibility in almond (Prunus dulcis) is attributed to the presence of the S f haplotype, allelic to and dominant over the series of S-alleles controlli...
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Article
Phenotypic diversity among local Spanish and foreign peach and nectarine [Prunus persica (L.) Batsch] accessions
Phenotypic data for tree and fruit characteristics was collected over three consecutive years from a germplasm collection of 94 peach and nectarine accessions representing both traditional Spanish as well as f...
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Article
Open AccessHeterogeneity in the entire genome for three genotypes of peach [Prunus persica(L.) Batsch] as distinguished from sequence analysis of genomic variants
Peach [Prunus persica (L.) Batsch] is an economically important fruit crop that has become a genetic-genomic model for all Prunus species in the family Rosaceae. A doubled haploid reference genome sequence length...
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Article
High density SNP map** and QTL analysis for fruit quality characteristics in peach (Prunus persica L.)
Single nucleotide polymorphisms (SNPs) were used to construct an integrated SNP linkage map of peach (Prunus persica (L.) Batsch). A set of 1,536 SNPs were evaluated with the GoldenGate® Genoty** assay in two m...
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Article
Effect prediction of identified SNPs linked to fruit quality and chilling injury in peach [Prunus persica (L.) Batsch]
Single nucleotide polymorphisms (SNPs) are a fundamental source of genomic variation. Large SNP panels have been developed for Prunus species. Fruit quality traits are essential peach breeding program objectives ...
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Article
Influence of year and genetic factors on chilling injury susceptibility in peach (Prunus persica (L.) Batsch)
Chilling injury (CI) is a major physiological problem limiting consumption and export of peach and nectarine (Prunus persica (L.) Batsch). To clarify the genetic basis for chilling injury, inheritance of the majo...
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Article
Open AccessWhole genome sequencing of peach (Prunus persica L.) for SNP identification and selection
The application of next generation sequencing technologies and bioinformatic scripts to identify high frequency SNPs distributed throughout the peach genome is described. Three peach genomes were sequenced usi...
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Article
Open AccessA fruit quality gene map of Prunus
Prunus fruit development, growth, ripening, and senescence includes major biochemical and sensory changes in texture, color, and flavor. The genetic dissection of these complex processes has important application...
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Article
Discriminating ability of molecular markers and morphological characterization in the establishment of genetic relationships in cultivated genotypes of almond and related wild species
A total 23 morphological traits, 19 AFLP-primer combinations, 80 RAPD primers and 32 SSR primer pair were used to compare the informativeness and efficiency of random amplified polymorphic DNA (RAPD), amplifie...
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Article
Development of ChillPeach genomic tools and identification of cold-responsive genes in peach fruit
The ChillPeach database was developed to facilitate identification of genes controlling chilling injury (CI), a global-scale post-harvest physiological disorder in peach. It contained 7,862 high-quality ESTs (...