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  1. Map** periplasmic binding protein oligosaccharide recognition with neutron crystallography

    Numerous studies have shown how periplasmic binding proteins (PBPs) bind substrates with exquisite specificity, even distinguishing between sugar...

    Shantanu Shukla, Dean A. Myles, Matthew J. Cuneo in Scientific Reports
    Article Open access 21 October 2022
  2. Periplasmic chitooligosaccharide-binding protein requires a three-domain organization for substrate translocation

    Periplasmic solute-binding proteins (SBPs) specific for chitooligosaccharides, (GlcNAc) n (n = 2, 3, 4, 5 and 6), are involved in the uptake of...

    Takayuki Ohnuma, Jun Tsujii, ... Tamo Fukamizo in Scientific Reports
    Article Open access 23 November 2023
  3. Protein-Protein Binding Kinetics by Biolayer Interferometry

    The specific kinetics and thermodynamics of protein-protein interactions underlie the molecular mechanisms of cellular functions; hence the...
    Jorge Santos-López, Sara Gómez, ... M. Cristina Vega in Advanced Technologies for Protein Complex Production and Characterization
    Chapter 2024
  4. FlhE functions as a chaperone to prevent formation of periplasmic flagella in Gram-negative bacteria

    The bacterial flagellum, which facilitates motility, is composed of ~20 structural proteins organized into a long extracellular filament connected to...

    Manuel Halte, Ekaterina P. Andrianova, ... Marc Erhardt in Nature Communications
    Article Open access 14 July 2024
  5. Widespread extracellular electron transfer pathways for charging microbial cytochrome OmcS nanowires via periplasmic cytochromes PpcABCDE

    Extracellular electron transfer (EET) via microbial nanowires drives globally-important environmental processes and biotechnological applications for...

    Pilar C. Portela, Catharine C. Shipps, ... Nikhil S. Malvankar in Nature Communications
    Article Open access 20 March 2024
  6. Conformational Investigation of the Asymmetric Periplasmic Domains of E. coli LptB2FGC Using SDSL CW EPR Spectroscopy

    The majority of pathogenic Gram-negative bacteria benefit from intrinsic antibiotic resistance, attributed primarily to the lipopolysaccharide (LPS)...

    Nicholas P. Cina, Candice S. Klug in Applied Magnetic Resonance
    Article 07 August 2023
  7. Structure and mechanism of a tripartite ATP-independent periplasmic TRAP transporter

    In bacteria and archaea, tripartite ATP-independent periplasmic (TRAP) transporters uptake essential nutrients. TRAP transporters receive their...

    James S. Davies, Michael J. Currie, ... Renwick C. J. Dobson in Nature Communications
    Article Open access 27 February 2023
  8. Conformational coupling of the sialic acid TRAP transporter HiSiaQM with its substrate binding protein HiSiaP

    The tripartite ATP-independent periplasmic (TRAP) transporters use an extra cytoplasmic substrate binding protein (SBP) to transport a wide variety...

    Martin F. Peter, Jan A. Ruland, ... Gregor Hagelueken in Nature Communications
    Article Open access 08 January 2024
  9. Crystal structure and metal binding properties of the periplasmic iron component EfeM from Pseudomonas syringae EfeUOB/M iron-transport system

    EfeUOB/M has been characterised in Pseudomonas syringae pathovar. syringae as a novel type of ferrous-iron transporter, consisting of an...

    Mohan B. Rajasekaran, Rohanah Hussain, ... Kimberly A. Watson in BioMetals
    Article Open access 29 March 2022
  10. Structural and mechanistic analysis of a tripartite ATP-independent periplasmic TRAP transporter

    Tripartite ATP-independent periplasmic (TRAP) transporters are found widely in bacteria and archaea and consist of three structural domains, a...

    Martin F. Peter, Jan A. Ruland, ... Gregor Hagelueken in Nature Communications
    Article Open access 04 August 2022
  11. The critical role of a conserved lysine residue in periplasmic nitrate reductase catalyzed reactions

    Periplasmic nitrate reductase NapA from Campylobacter jejuni ( C. jejuni ) contains a molybdenum cofactor (Moco) and a 4Fe–4S cluster and catalyzes the...

    Nitai C. Giri, Breeanna Mintmier, ... Partha Basu in JBIC Journal of Biological Inorganic Chemistry
    Article 23 May 2024
  12. Dynamic interplay between the periplasmic chaperone SurA and the BAM complex in outer membrane protein folding

    Correct folding of outer membrane proteins (OMPs) into the outer membrane of Gram-negative bacteria depends on delivery of unfolded OMPs to the...

    Bob Schiffrin, Jonathan M. Machin, ... Antonio N. Calabrese in Communications Biology
    Article Open access 08 June 2022
  13. A role for the periplasmic adaptor protein AcrA in vetting substrate access to the RND efflux transporter AcrB

    Tripartite resistance-nodulation-division (RND) efflux pumps, such as AcrAB-TolC of Salmonella Typhimurium, contribute to antibiotic resistance and...

    Ilyas Alav, Vassiliy N. Bavro, Jessica M. A. Blair in Scientific Reports
    Article Open access 19 March 2022
  14. Disulfide-compatible phage-assisted continuous evolution in the periplasmic space

    The directed evolution of antibodies has yielded important research tools and human therapeutics. The dependence of many antibodies on disulfide...

    Mary S. Morrison, Tina Wang, ... David R. Liu in Nature Communications
    Article Open access 13 October 2021
  15. S288T mutation altering MmpL3 periplasmic domain channel and H-bond network: a novel dual drug resistance mechanism

    Context

    Mycobacterial membrane proteins Large 3 (MmpL3) is responsible for the transport of mycobacterial acids out of cell membrane to form cell...

    Yutong Ge, Qing Luo, ... Weiwei Ouyang in Journal of Molecular Modeling
    Article 15 January 2024
  16. Protein–Protein Interactions: Oxidative Bacterial Two Hybrid

    Protein–protein interaction studies are essential to understand how proteins organize themselves into interaction networks and thus influence...
    Callypso Pellegri, Emmanuelle Bouveret, Laetitia Houot in Bacterial Secretion Systems
    Protocol 2024
  17. Directed evolution of tripartite ATP-independent periplasmic transporter for 3-Hydroxypropionate biosynthesis

    Abstract

    Our previous study’s introduction of the malonic acid assimilation pathway into Escherichia coli enabled biosynthesis of 3-Hydroxypropionate...

    Bo Liang, ** Zhang, ... Jianming Yang in Applied Microbiology and Biotechnology
    Article 16 December 2022
  18. A periplasmic cinched protein is required for siderophore secretion and virulence of Mycobacterium tuberculosis

    Iron is essential for growth of Mycobacterium tuberculosis , the causative agent of tuberculosis. To acquire iron from the host, M. tuberculosis uses...

    Lei Zhang, James E. Kent, ... Michael Niederweis in Nature Communications
    Article Open access 26 April 2022
  19. Engineering of Sensory Proteins with New Ligand-Binding Capacities

    Biosensors based on whole cell living bacteria or their isolated components mostly use the capacity of natural protein classes to “sense,” in other...
    Diogo Tavares, Vitali Maffenbeier, Jan Roelof van der Meer in Handbook of Cell Biosensors
    Reference work entry 2022
  20. Effects of adding poly-histidine tag on stability, antimicrobial activity and safety of recombinant buforin I expressed in periplasmic space of Escherichia coli

    The lack of cost-effective methods for producing antimicrobial peptides has made it impossible to use their high potential as a new and powerful...

    Sahar Roshanak, Hanieh Yarabbi, ... Ali Javadmanesh in Scientific Reports
    Article Open access 04 April 2023
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