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  1. Challenges in Eventing Horizontal Gene Transfer

    Horizontal gene transfer (HGT) takes place when two organisms share their genetic material. Contrary to the ancestral transfer of genes, viz....
    Mahak Bhushan, Goutam Kumar Dhandh, ... Prashanth Suravajhala in Microbial Genomic Islands in Adaptation and Pathogenicity
    Chapter 2023
  2. Gene Transfer

    In addition to vertical gene transfer between generations, microbes often transfer their genes horizontally. Horizontal gene transfer contributes...
    Chapter 2023
  3. Predicting horizontal gene transfers with perfect transfer networks

    Background

    Horizontal gene transfer inference approaches are usually based on gene sequences: parametric methods search for patterns that deviate from...

    Alitzel López Sánchez, Manuel Lafond in Algorithms for Molecular Biology
    Article Open access 06 February 2024
  4. A global survey of prokaryotic genomes reveals the eco-evolutionary pressures driving horizontal gene transfer

    Horizontal gene transfer, the exchange of genetic material through means other than reproduction, is a fundamental force in prokaryotic genome...

    Marija Dmitrijeva, Janko Tackmann, ... Christian von Mering in Nature Ecology & Evolution
    Article Open access 05 March 2024
  5. Lifestyle changes in Botryosphaeriaceae as evidenced by ancestral genome expansion and horizontal gene transfer

    Botryosphaeriaceae (Botryosphaeriales, Dothideomycetes, Ascomycota) encompasses commonly encountered opportunistic pathogens that cause stem cankers...

    Xuncheng Wang, Wei Zhang, ... Jiye Yan in Fungal Diversity
    Article Open access 11 December 2023
  6. Horizontal Gene Transfer in Fungi and Its Ecological Importance

    Fungi are one of the most diverse kingdoms in the tree of life, thrive in virtually every habitat on the planet, and are vital for a plethora of...
    Carla Gonçalves, Chris Todd Hittinger, Antonis Rokas in Fungal Associations
    Chapter 2024
  7. Cooperative antibiotic resistance facilitates horizontal gene transfer

    The rise of β-lactam resistance among pathogenic bacteria, due to the horizontal transfer of plasmid-encoded β-lactamases, is a current global health...

    Qinqin Wang, Shaodong Wei, ... Jonas Stenløkke Madsen in The ISME Journal
    Article Open access 22 March 2023
  8. Extensive remodeling of sugar metabolism through gene loss and horizontal gene transfer in a eukaryotic lineage

    Background

    In yeasts belonging to the subphylum Saccharomycotina, genes encoding components of the main metabolic pathways, like alcoholic...

    Ana Pontes, Francisca Paraíso, ... Paula Gonçalves in BMC Biology
    Article Open access 30 May 2024
  9. Vertical and horizontal gene transfer shaped plant colonization and biomass degradation in the fungal genus Armillaria

    The fungal genus Armillaria contains necrotrophic pathogens and some of the largest terrestrial organisms that cause tremendous losses in diverse...

    Neha Sahu, Boris Indic, ... László G. Nagy in Nature Microbiology
    Article 07 August 2023
  10. The horizontal gene transfer of perchlorate reduction genomic island in three bacteria from an ecological niche

    Abstract

    Three new strains of dissimilatory perchlorate-reducing bacteria (DPRB), QD19-16, QD1-5, and P3-1, were isolated from an active sludge....

    Hao-Ming Wang, Guang-Rong Hu, ... Fu-Li Li in Applied Microbiology and Biotechnology
    Article 30 December 2023
  11. Salivary proteins potentially derived from horizontal gene transfer are critical for salivary sheath formation and other feeding processes

    Herbivorous insects employ an array of salivary proteins to aid feeding. However, the mechanisms behind the recruitment and evolution of these genes...

    Hai-Jian Huang, Li-Li Li, ... Chuan-** Zhang in Communications Biology
    Article Open access 02 March 2024
  12. Horizontal transfer of tRNA genes to mitochondrial plasmids facilitates gene loss from fungal mitochondrial DNA

    Fungal and plant mitochondria are known to exchange DNA with retroviral plasmids. Transfer of plasmid DNA to the organellar genome is best known and...

    Mathijs Nieuwenhuis, Jeroen Groeneveld, Duur K. Aanen in Current Genetics
    Article Open access 30 November 2022
  13. In the interkingdom horizontal gene transfer, the small rolA gene is a big mystery

    Abstract

    The biological function of the agrobacterial oncogene rol A is very poorly understood compared to other components of the mechanism of...

    Galina N. Veremeichik, Dmitrii V. Bulgakov, ... Dmitrii S. Makhazen in Applied Microbiology and Biotechnology
    Article 07 March 2023
  14. Microbial diversity and ecological complexity emerging from environmental variation and horizontal gene transfer in a simple mathematical model

    Background

    Microbiomes are generally characterized by high diversity of coexisting microbial species and strains, and microbiome composition typically...

    Sanasar G. Babajanyan, Sofya K. Garushyants, ... Eugene V. Koonin in BMC Biology
    Article Open access 04 July 2024
  15. Horizontal gene transfer facilitates the molecular reverse-evolution of antibiotic sensitivity in experimental populations of H. pylori

    Reversing the evolution of traits harmful to humans, such as antimicrobial resistance, is a key ambition of applied evolutionary biology. A major...

    An N. T. Nguyen, Rebecca Gorrell, ... Michael J. McDonald in Nature Ecology & Evolution
    Article 04 January 2024
  16. Phylogenomics of five Pseudanabaena cyanophages and evolutionary traces of horizontal gene transfer

    Background

    Along with the fast development and urbanization in develo** countries, the waterbodies aside the growing cities become heavily polluted...

    Jie Zhu, Feng Yang, ... Cong-Zhao Zhou in Environmental Microbiome
    Article Open access 13 January 2023
  17. A novel aminotransferase gene and its regulator acquired in Saccharomyces by a horizontal gene transfer event

    Background

    Horizontal gene transfer (HGT) is an evolutionary mechanism of adaptive importance, which has been deeply studied in wine S. cerevisiae ...

    Sebastián M. Tapia, Laura G. Macías, ... Eladio Barrio in BMC Biology
    Article Open access 08 May 2023
  18. Horizontal gene transfer and adaptive evolution in bacteria

    Horizontal gene transfer (HGT) is arguably the most conspicuous feature of bacterial evolution. Evidence for HGT is found in most bacterial genomes....

    Brian J. Arnold, I-Ting Huang, William P. Hanage in Nature Reviews Microbiology
    Article 12 November 2021
  19. The resistomes of Mycobacteroides abscessus complex and their possible acquisition from horizontal gene transfer

    Background

    Mycobacteroides abscessus complex (MABC), an emerging pathogen, causes human infections resistant to multiple antibiotics. In this study,...

    Shay Lee Chong, Joon Liang Tan, Yun Fong Ngeow in BMC Genomics
    Article Open access 20 October 2022
  20. Systematic evaluation of horizontal gene transfer between eukaryotes and viruses

    Gene exchange between viruses and their hosts acts as a key facilitator of horizontal gene transfer and is hypothesized to be a major driver of...

    Nicholas A. T. Irwin, Alexandros A. Pittis, ... Patrick J. Keeling in Nature Microbiology
    Article 31 December 2021
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