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  1. X-chromosome inactivation in human iPSCs provides insight into X-regulated gene expression in autosomes

    Background

    Variation in X chromosome inactivation (XCI) in human-induced pluripotent stem cells (hiPSCs) can impact their ability to model biological...

    Hande Topa, Clara Benoit-Pilven, ... Olli Pietiläinen in Genome Biology
    Article Open access 31 May 2024
  2. X‑chromosome loss rescues Sertoli cell maturation and spermatogenesis in Klinefelter syndrome

    Klinefelter syndrome (47,XXY) causes infertility with a testicular histology comprising two types of Sertoli cell-only tubules, representing mature...

    Sofia B. Winge, Niels E. Skakkebaek, ... Kristian Almstrup in Cell Death & Disease
    Article Open access 05 June 2024
  3. XIST dampens X chromosome activity in a SPEN-dependent manner during early human development

    XIST (X-inactive specific transcript) long noncoding RNA (lncRNA) is responsible for X chromosome inactivation (XCI) in placental mammals, yet it...

    Charbel Alfeghaly, Gaël Castel, ... Claire Rougeulle in Nature Structural & Molecular Biology
    Article Open access 04 June 2024
  4. Replication dynamics identifies the folding principles of the inactive X chromosome

    Chromosome-wide late replication is an enigmatic hallmark of the inactive X chromosome (**). How it is established and what it represents remains...

    Rawin Poonperm, Saya Ichihara, ... Ichiro Hiratani in Nature Structural & Molecular Biology
    Article Open access 10 August 2023
  5. Biochemical Features of X or Y Chromosome-Bearing Spermatozoa for Sperm Sexing

    Abstract

    This review presents information on biochemical features of spermatozoa bearing X or Y chromosome, enabling production of a sperm fraction...

    Denis V. Pozdyshev, Nina A. Kombarova, Vladimir I. Muronetz in Biochemistry (Moscow)
    Article 18 May 2023
  6. Chromosome Numbers

    The basic chromosome number in Panicum is x = 9, being uniform for the genus (Dubcovsky and Zuloaga 1991; Aliscioni et al. 2003). However, different...
    Fernando Zuloaga, Sandra Aliscioni in Panicum (Poaceae)
    Chapter 2023
  7. EpiTy**: analysis of epigenetic aberrations in parental imprinting and X-chromosome inactivation using RNA-seq

    Human pluripotent stem cells (hPSCs) hold a central role in studying human development, in disease modeling and in regenerative medicine. These cells...

    Roni Sarel-Gallily, Gal Keshet, ... Nissim Benvenisty in Nature Protocols
    Article 01 November 2023
  8. Identification of skewed X chromosome inactivation using exome and transcriptome sequencing in patients with suspected rare genetic disease

    Background

    X-chromosome inactivation (XCI) is an epigenetic process that occurs during early development in mammalian females by randomly silencing...

    Numrah Fadra, Laura E Schultz-Rogers, ... Eric W Klee in BMC Genomics
    Article Open access 16 April 2024
  9. Chromosome Painting Using Chromosome-Specific BAC Clones

    Chromosome painting (CP) refers to visualization of large chromosome regions, chromosome arms or entire chromosomes via fluorescence in situ...
    Terezie M. Mandáková, Martin A. Lysak in Plant Cytogenetics and Cytogenomics
    Protocol 2023
  10. Constitutive heterochromatin propagation contributes to the X chromosome inactivation

    Imprinted X chromosome inactivation (iXCI) balances the expression of X-linked genes in preimplantation embryos and extraembryonic tissues in...

    Alexander I. Shevchenko, Nikita A. Rifel, ... Irina S. Zakharova in Chromosome Research
    Article 03 August 2022
  11. RNA polymerase II depletion from the inactive X chromosome territory is not mediated by physical compartmentalization

    Subnuclear compartmentalization has been proposed to play an important role in gene regulation by segregating active and inactive parts of the genome...

    Samuel Collombet, Isabell Rall, ... Edith Heard in Nature Structural & Molecular Biology
    Article Open access 08 June 2023
  12. **st spatially amplifies SHARP/SPEN recruitment to balance chromosome-wide silencing and specificity to the X chromosome

    Although thousands of long non-coding RNAs (lncRNAs) are encoded in mammalian genomes, their mechanisms of action are poorly understood, in part...

    Joanna W. Jachowicz, Mackenzie Strehle, ... Mitchell Guttman in Nature Structural & Molecular Biology
    Article 17 March 2022
  13. Pre-implantation development of cattle embryos produced from fresh bull semen enriched for X- chromosome-bearing spermatozoa using a monoclonal antibody

    Immunological approaches are gaining attention as a convenient and economical method for sex-sorting mammalian spermatozoa. A monoclonal antibody...

    Sang Jun Uhm, Young Tae Heo, ... Mukesh Kumar Gupta in Veterinary Research Communications
    Article 11 July 2023
  14. Unraveling the role of **st in X chromosome inactivation: insights from rabbit model and deletion analysis of exons and repeat A

    X chromosome inactivation (XCI) is a process that equalizes the expression of X-linked genes between males and females. It relies on **st ,...

    Mingming Liang, Lichao Zhang, ... Zhanjun Li in Cellular and Molecular Life Sciences
    Article Open access 29 March 2024
  15. X-chromosome inactivation patterns depend on age and tissue but not conception method in humans

    Female somatic X-chromosome inactivation (XCI) balances the X-linked transcriptional dosages between the sexes, randomly silencing the maternal or...

    Patrycja Juchniewicz, Anna Kloska, ... Ewa Piotrowska in Chromosome Research
    Article Open access 25 January 2023
  16. Usefulness of the X-Chromosome on Forensic Science

    In kinship analyses, as well as in other forensic studies, autosomal markers are, generally, the tool of choice. However, there are some more complex...
    Cláudia Gomes, Eduardo Arroyo-Pardo in Handbook of DNA Profiling
    Reference work entry 2022
  17. Gene regulation in time and space during X-chromosome inactivation

    X-chromosome inactivation (XCI) is the epigenetic mechanism that ensures X-linked dosage compensation between cells of females (XX karyotype) and...

    Agnese Loda, Samuel Collombet, Edith Heard in Nature Reviews Molecular Cell Biology
    Article 10 January 2022
  18. An Overview to the Index to Chromosome Numbers in Asteraceae Database: Revisiting Base Chromosome Numbers, Polyploidy, Descending Dysploidy, and Hybridization

    A brief overview to the Index to Chromosome Numbers in Asteraceae database is provided. The database contains karyological information on Asteraceae...
    John C. Semple, Kuniaki Watanabe in Plant Genomic and Cytogenetic Databases
    Protocol 2023
  19. Transcription and replication meet the silent X chromosome territory

    Frederic Zimmer, M. Felicia Basilicata, Claudia Isabelle Keller Valsecchi in Nature Structural & Molecular Biology
    Article 10 August 2023
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