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Development of Genic-SSR Markers in Myrtle by RNA-seq
Myrtle ( Myrtus communis L.) is a typical plant cover of the Mediterranean region. It is an evergreen perennial shrub or small tree belonging to...
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Development of unigene-derived SSR markers from RNA-seq data of Uraria lagopodioides (Fabaceae) and their application in the genus Uraria Desv. (Fabaceae)
BackgroundUraria Desv. belongs to the tribe Desmodieae (Fabaceae), a group of legume plants, some of which have medicinal properties. However, due...
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Development of SSR markers and genetic diversity analysis based on RAD-seq technology among Chinese populations of Daphnia magna
BackgroundDaphnia magna belongs to the Cladocera order and plays an important role in the aquatic ecosystem. With the intensification of water...
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The development of SSR markers from the endangered plant Tetracentron sinense Oliv. (Tetracentraceae) based on RAD–seq technique
Conservation genetics research of Tetracentron sinense , an endangered tree species in China used as medicine, ornament, and for its timber, depends...
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The novel developed microsatellite markers revealed potential hybridization among Cymbidium species and the interspecies sub-division of C. goeringii and C. ensifolium
BackgroundOrchids ( Cymbidium spp.) exhibit significant variations in floral morphology, pollinator relations, and ecological habitats. Due to their...
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Application of bulk segregant RNA-Seq (BSR-Seq) and allele-specific primers to study soybean powdery mildew resistance
BackgroundPowdery mildew (PM) is one of the important soybean diseases, and host resistance could practically contribute to soybean PM management. To...
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Population structure of sumac (Rhus coriaria L.) from Türkiye based on transcriptome-developed SSR marker
Sumac ( Rhus coriaria L . ) is known for medicinal properties since at least the time of Theophrastus in the ancient Graeco-Roman time. Indeed, in the...
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A SNP-based linkage map** revealed a mutant-origin major quantitative trait locus for seed size in A05 chromosome of groundnut (Arachis hypogaea L.)
Seed size is directly involved in determining the yield of groundnut. Here, we report the identification of a main QTL for large seed size using a F 2 ...
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De novo full-length transcriptome analysis of two ecotypes of Phragmites australis (swamp reed and dune reed) provides new insights into the transcriptomic complexity of dune reed and its long-term adaptation to desert environments
BackgroundThe extremely harsh environment of the desert is changing dramatically every moment, and the rapid adaptive stress response in the short...
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Genome survey and development of 13 SSR markers in Eucalyptus cloeziana by NGS
Eucalyptus cloeziana is a valuable timber tree species for its high durability and excellent sawmilling qualities. However, there is lack of complete...
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Improving Chickpea Genetic Gain Under Rising Drought and Heat Stress Using Breeding Approaches and Modern Technologies
Increasing grain legume production, particularly for chickpea, will provide essential “plant-based dietary protein” and other micronutrients under...
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Genome-wide SSR markers in bottle gourd: development, characterization, utilization in assessment of genetic diversity of National Genebank of India and synteny with other related cucurbits
AbstractLagenaria siceraria (Molina) Standley is an important cultivated crop with its immense importance in pharmaceutical industry and as...
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Genetic diversity analysis and variety identification using SSR and SNP markers in melon
Melon is an important horticultural crop with a pleasant aromatic flavor and abundance of health-promoting substances. Numerous melon varieties have...
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Genetic variation and association map** in the F2 population of the Perilla crop (Perilla frutescens L.) using new developed Perilla SSR markers
The transcriptome sequencing approach RNA-seq represents a powerful tool for transcriptional analysis and development of simple sequence repeat (SSR)...
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Genome-wide identification and expression profile analysis of metal tolerance protein gene family in Eucalyptus grandis under metal stresses
Metal tolerance proteins (MTPs) as Me 2+ /H + (K + ) antiporters participate in the transport of divalent cations, leading to heavy metal stress resistance...
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Genetic map** and physiological analysis of chlorophyll-deficient mutant in Brassica napus L
BackgroundLeaf color mutants have reduced photosynthetic efficiency, which has severely negative impacts on crop growth and economic product yield....
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Identification and characterization of SSR markers in taro [Colocasia esculenta (L.) Schott] by RAD sequencing
Taro [ Colocasia esculenta (L.) Schott] is an old crop with high genetic diversity. However, the breeding of taro is limited by the lack of...
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Rapid identification of candidate genes controlling male-sterility in Foxtail millet (Setaria italica)
Photo-(thermo-) sensitive genic male-sterile line is the key component of two-line hybridization system in foxtail millet ( Setaria italica ), but the...
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Physiological responses to drought stress of three pine species and comparative transcriptome analysis of Pinus yunnanensis var. pygmaea
Drought stress can significantly affect plant growth, development, and yield. Fewer comparative studies have been conducted between different species...
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Tea Plant Genomic, Transcriptomic, and Metabolic Databases
Tea plant, an important nonalcoholic beverage crop, is extensively cultivated worldwide. The exponential growth of biological sequence data has made...