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Machine learning on alignment features for parent-of-origin classification of simulated hybrid RNA-seq
BackgroundParent-of-origin allele-specific gene expression (ASE) can be detected in interspecies hybrids by virtue of RNA sequence variants between...
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Evidence for parent-of-origin effects in autism spectrum disorder: a narrative review
Autism spectrum disorder (ASD) is a heterogeneous group of early-onset neurodevelopmental disorders known to be highly heritable with a complex...
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Phenome-wide analyses identify an association between the parent-of-origin effects dependent methylome and the rate of aging in humans
BackgroundThe variation in the rate at which humans age may be rooted in early events acting through the genomic regions that are influenced by such...
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A role for worm cutl-24 in background- and parent-of-origin-dependent ER stress resistance
BackgroundOrganisms in the wild can acquire disease- and stress-resistance traits that outstrip the programs endogenous to humans. Finding the...
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Examining parent-of-origin effects on transcription and RNA methylation in mediating aggressive behavior in honey bees (Apis mellifera)
Conflict between genes inherited from the mother (matrigenes) and the father (patrigenes) is predicted to arise during social interactions among...
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Genome-Wide Identification of Allele-Specific Gene Expression in a Parent-of-Origin Specific Manner
Upon fertilization, normal endosperm and embryo development require the contribution of both the maternal and paternal genomes. However, certain...
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Use of Soil Maps to Interpret Soil-Landform Assemblages and Soil-Landscape Evolution
Soils are a key link to the surficial sedimentologic system(s) that originally deposited the unconsolidated parent material, or to the weathering...
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Detailed observation on expression dynamics of Polycomb group genes during rice early endosperm development in subspecies hybridization reveals their characteristics of parent-of-origin genes
BackgroundParent-of-origin gene expression and its role in seed development have drown a great attention in recent years. Genome-wide analysis has...
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Molecular and morphological evidences for the hybrid origin of Kushui Rose
Natural hybridization has played a significant role in the evolution of the genus Rosa . Kushui Rose ( R. sertata × R. rugosa ) is a natural hybrid of R....
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Advances in genomic characterization of Urochloa humidicola: exploring polyploid inheritance and apomixis
Key messageWe present the highest-density genetic map for the hexaploid Urochloa humidicola . SNP markers expose genetic organization, reproduction,...
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Pedigree Validation and Reconstruction Applied in the Cultivated Potato Using 35 Microsatellites Markers
Knowledge of the parental origin of crop species is a prerequisite for formulating effective strategies for genetic conservation, management, and...
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Species of Nicotiana as the Sources of Cytoplasmic Male Sterility for Cultivated Tobacco
In tobacco, cytoplasmic male sterility (CMS) is the most extensively studied and practically exploited aspect of extrachromosomal inheritance. It...
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Parent-of-origin effects on quantitative phenotypes in a large Hutterite pedigree
The impact of the parental origin of associated alleles in GWAS has been largely ignored. Yet sequence variants could affect traits differently...
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Heroic Viticulture in Itata Valley, Chile: Characteristics and Challenges for the Development of Unique Wines in Southern Chilean Vineyards
The Itata Valley is located in south-central Chile. It is one of the oldest valleys with rainfed viticulture, hillside vineyards, and head-trained...
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Genetic analysis of global faba bean diversity, agronomic traits and selection signatures
Key messageWe identified marker-trait associations for key faba bean agronomic traits and genomic signatures of selection within a global germplasm...
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Multiplex DNA fluorescence in situ hybridization to analyze maternal vs. paternal C. elegans chromosomes
Recent advances in microscopy have enabled studying chromosome organization at the single-molecule level, yet little is known about inherited...
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Origin and diversity of Capsella bursa-pastoris from the genomic point of view
BackgroundCapsella bursa-pastoris , a cosmopolitan weed of hybrid origin, is an emerging model object for the study of early consequences of...
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Origin and Properties of Deep Sands of Southeastern Cambodia: Some Preliminary Findings
Deep sandy soils are a feature of many landscapes in Southeast Asia but the explanations for their origin are not always known. Deep sand and sand on...
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Rare Earths in Soils
This chapter aims to review and summarize the scattered existing literature on the presence of the so-called rare earth elements (REEs) in soils by...
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Maternal patterns of inheritance alter transcript expression in eggs
BackgroundModifications to early development can lead to evolutionary diversification. The early stages of development are under maternal control, as...
