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  1. Amino acid metabolism regulated by lncRNAs: the propellant behind cancer metabolic reprogramming

    Metabolic reprogramming is one of the main characteristics of cancer cells and plays pivotal role in the proliferation and survival of cancer cells....

    Qifan Hu, Yutong Li, ... Tianyu Han in Cell Communication and Signaling
    Article Open access 01 May 2023
  2. 4-phenylbutyric acid improves sepsis-induced cardiac dysfunction by modulating amino acid metabolism and lipid metabolism via Comt/Ptgs2/Ppara

    Introduction

    Cardiac dysfunction after sepsis the most common and severe sepsis-related organ failure. The severity of cardiac damage in sepsis...

    Yuanqun Zhou, Yu Zhu, ... Tao Li in Metabolomics
    Article Open access 19 April 2024
  3. Taurine amino acid supplementation impacts performance, blood hematology, oxidative stress, and jejunum morphology in broiler chickens

    Excess levels of free radicals cause oxidative damage to cells. Taurine is a rare amino acid with antioxidant effects whose dietary deficiency...

    Tahereh. Sandoghdar, Mehrdad. Irani, Shahabodin. Gharahveysi in Tropical Animal Health and Production
    Article 13 April 2024
  4. Ancestral Sequence Reconstruction of the Ribosomal Protein uS8 and Reduction of Amino Acid Usage to a Smaller Alphabet

    Understanding the origin and early evolution of proteins is important for unveiling how the RNA world developed into an RNA–protein world. Because...

    Fangzheng Zhao, Satoshi Akanuma in Journal of Molecular Evolution
    Article 18 November 2022
  5. A GSTP1-mediated lactic acid signaling promotes tumorigenesis through the PPP oxidative branch

    Lactic acidosis is a feature of solid tumors and plays fundamental role(s) rendering cancer cells to adapt to diverse metabolic stresses, but the...

    Yandi Sun, Qian He, ... Yan Luo in Cell Death & Disease
    Article Open access 25 July 2023
  6. Amino acid utilization allows intestinal dominance of Lactobacillus amylovorus

    The mammalian intestine harbors heterogeneous distribution of microbes among which specific taxa (e.g. Lactobacillus ) dominate across mammals....

    Yujia **g, Chunlong Mu, ... Weiyun Zhu in The ISME Journal
    Article 27 July 2022
  7. Interactive effects of dietary leucine and isoleucine affect amino acid profile and metabolism through AKT/TOR signaling pathways in blunt snout bream (Megalobrama amblycephala)

    The purpose of this research is to explore the interaction between dietary leucine and isoleucine levels on whole-body composition, plasma and liver...

    Mang-mang Wang, Yang-yang Huang, ... Guang-zhen Jiang in Fish Physiology and Biochemistry
    Article 16 December 2022
  8. Amino Acid Specificity of Ancestral Aminoacyl-tRNA Synthetase Prior to the Last Universal Common Ancestor Commonote commonote

    Extant organisms commonly use 20 amino acids in protein synthesis. In the translation system, aminoacyl-tRNA synthetase (ARS) selectively binds an...

    Ryutaro Furukawa, Shin-ichi Yokobori, ... Akihiko Yamagishi in Journal of Molecular Evolution
    Article Open access 27 January 2022
  9. Serum metabolic signatures for Alzheimer’s Disease reveal alterations in amino acid composition: a validation study

    Introduction

    Alzheimer’s Disease (AD) is complex and novel approaches are urgently needed to aid in diagnosis. Blood is frequently used as a source...

    Jonas Ellegaard Nielsen, Trygve Andreassen, ... Shona Pedersen in Metabolomics
    Article Open access 05 January 2024
  10. Ancestral Sequence Reconstruction and Alternate Amino Acid States Guide Protein Library Design for Directed Evolution

    Engineered proteins possess nearly limitless possibilities in medical and industrial applications but finding a precise amino acid sequence for these...
    James VanAntwerp, Patrick Finneran, ... Daniel Woldring in Yeast Surface Display
    Protocol 2022
  11. Bayesian Cross-Validation Comparison of Amino Acid Replacement Models: Contrasting Profile Mixtures, Pairwise Exchangeabilities, and Gamma-Distributed Rates-Across-Sites

    Models of amino acid replacement are central to modern phylogenetic inference, particularly so when dealing with deep evolutionary relationships....

    Thomas Bujaki, Nicolas Rodrigue in Journal of Molecular Evolution
    Article Open access 07 October 2022
  12. Nitrogen fertilization enhances growth and development of Cacopsylla chinensis by modifying production of ferulic acid and amino acids in pears

    Psyllids feed exclusively on plant sap, which is an unbalanced diet for herbivores due to its low nitrogen content. Therefore, the...

    Zifang Qin, Yang Ge, ... Wangpeng Shi in Journal of Pest Science
    Article 28 November 2023
  13. Characterization of the antioxidant and angiotensin I-converting enzyme inhibitory activities of lizardfish Saurida wanieso viscera sauce and their correlation with the amino acid profiles

    The biological activities of lizardfish viscera sauce under three different fermentation conditions were characterized, and the amino acid profiles...

    Chan Zhong, Jie-Ting Geng, ... Kazufumi Osako in Fisheries Science
    Article 11 October 2022
  14. A complete inventory of long-chain polyunsaturated fatty acid biosynthesis pathway enzymes in the miniaturized cyprinid Paedocypris micromegethes

    The capacity for long-chain polyunsaturated fatty acid (LC-PUFA) biosynthesis activity in a species depends on the enzymatic activities of fatty...

    Ka-Kei Sam, Nyok-Sean Lau, ... Alexander Chong Shu-Chien in Fish Physiology and Biochemistry
    Article 29 May 2022
  15. Delineation of the CYP505E subfamily of fungal self-sufficient in-chain hydroxylating cytochrome P450 monooxygenases

    Abstract

    Cytochrome P450 monooxygenases (CYP450s) are abundant in eukaryotes, specifically in plants and fungi where they play important roles in the...

    Martha Sophia Smit, Mpeyake Jacob Maseme, ... Diederik Johannes Opperman in Applied Microbiology and Biotechnology
    Article 06 January 2023
  16. Superoxide Anion Radical Generation in Photosynthetic Electron Transport Chain

    Abstract

    This review analyzes data available in the literature on the rates, characteristics, and mechanisms of oxygen reduction to a superoxide anion...

    Marina A. Kozuleva, Boris N. Ivanov in Biochemistry (Moscow)
    Article 17 August 2023
  17. Molecular targets for antifungals in amino acid and protein biosynthetic pathways

    Fungi cause death of over 1.5 million people every year, while cutaneous mycoses are among the most common infections in the world. Mycoses vary...

    Aleksandra Kuplińska, Kamila Rząd in Amino Acids
    Article Open access 03 June 2021
  18. Sarcopenic metabolomic profile reflected a sarcopenic phenotype associated with amino acid and essential fatty acid changes

    Introduction

    Although sarcopenia greatly affects health and quality of life in older people, its pathophysiological causes are not fully elucidated....

    Rafael Opazo, Bárbara Angel, ... Cecilia Albala in Metabolomics
    Article 08 September 2021
  19. Structural insights into branch site proofreading by human spliceosome

    Selection of the pre-mRNA branch site (BS) by the U2 small nuclear ribonucleoprotein (snRNP) is crucial to prespliceosome (A complex) assembly. The...

    **aofeng Zhang, **echao Zhan, ... Yigong Shi in Nature Structural & Molecular Biology
    Article 09 January 2024
  20. The Amino Acid Transporter OsAAP4 Contributes to Rice Tillering and Grain Yield by Regulating Neutral Amino Acid Allocation through Two Splicing Variants

    Background

    Amino acids, which are transported by amino acid transporters, are the major forms of organic nitrogen utilized by higher plants. Among the...

    Zhongming Fang, Bowen Wu, Yuanyuan Ji in Rice
    Article Open access 06 January 2021
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