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  1. The effect of the 13C abundance of soil microbial DNA on identifying labelled fractions after ultracentrifugation

    Abstract

    DNA-based stable isotope probing (DNA-SIP) technology has been widely employed to trace microbes assimilating target substrates. However, the...

    Juan Wang, Huaiying Yao, **an Zhang in Applied Microbiology and Biotechnology
    Article Open access 03 May 2024
  2. Combined transcriptomics and proteomics unveil the impact of vitamin C in modulating specific protein abundance in the mouse liver

    Background

    Vitamin C (ascorbate) is a water-soluble antioxidant and an important cofactor for various biosynthetic and regulatory enzymes. Mice can...

    Lucie Aumailley, Antoine Bodein, ... Michel Lebel in Biological Research
    Article Open access 12 May 2024
  3. Abundance Calculation of Ciliates from Soil

    As ciliates cannot directly be extracted from the soil, abundance of ciliates requires culturing them followed by enumeration by variety of methods....
    Protocol 2024
  4. The Fate of Soil Organic Carbon from Compost: A Pot Test Study Using Labile Carbon and 13c Natural Abundance

    Recycled organic waste (OW) can be a valuable nutrient source for plant cultivation; however, knowledge is poor regarding its effect on soil carbon...

    Marco Grigatti, Claudio Ciavatta, Claudio Marzadori in Journal of Soil Science and Plant Nutrition
    Article Open access 27 February 2024
  5. Diversity and abundance of culturable fungal endophytes in leaves of susceptible and resistant alternate hosts of Cronartium pini and C. ribicola

    Cronartium pini and C. ribicola are rust fungi that cause destructive diseases of pines ( Pinus spp.). These rusts spread via alternate hosts, among...

    Juha Piispanen, Ulrich Bergmann, ... Juha Kaitera in European Journal of Plant Pathology
    Article Open access 27 May 2024
  6. Natural δ13C and δ15N Abundance of Plants and Soils Under Long-term N Addition in a Temperate Secondary Forest

    Long term atmospheric nitrogen (N) deposition affects carbon (C) and N cycling in forest ecosystems, thus changing the stable C isotope abundance of...

    Guancheng Liu, Qinggui Wang, ... Yajuan **ng in Journal of Soil Science and Plant Nutrition
    Article 22 April 2024
  7. Impact of mycoheterotrophy on the growth of Gentiana zollingeri (Gentianaceae), as suggested by size variation, morphology, and 13C abundance of flowering shoots

    Gentiana zollingeri is an annual photosynthetic plant that employs a mycoheterotrophic growth strategy during its underground seedling stage (initial...

    Masahide Yamato, Mai Yagita, ... Kenji Suetsugu in Journal of Plant Research
    Article 15 September 2023
  8. Abundance and Variety

    Seventeenth-century “mechanical philosophy”, particularly its Cartesian form, challenged the long-standing belief in final causes as explanatory...
    Chapter 2023
  9. Abundance estimation of plains zebras via search–encounter sampling

    Spatial capture–recapture (SCR) using search–encounter methods estimate population abundance from encounters of individually recognisable animals...

    Jason P. Marshal, Fitsum Abadi in European Journal of Wildlife Research
    Article Open access 01 April 2024
  10. Higher rat abundance in greener urban areas

    Urban greening has become an increasingly popular strategy to improve urban life and human health. However, there are indications that the presence...

    Marieke P. de Cock, Helen J. Esser, ... Miriam Maas in Urban Ecosystems
    Article Open access 01 March 2024
  11. Connectivity of stormwater ponds impacts Odonata abundance and species richness

    Context

    The successful dispersal of an animal depends, partly, on landscape connectivity. Urbanization poses risks to dispersal activities by...

    I. C. Richmond, M. C. Perron, ... F. R. Pick in Landscape Ecology
    Article Open access 28 February 2024
  12. Unveiling global species abundance distributions

    Whether most species are rare or have some intermediate abundance is a long-standing question in ecology. Here, we use more than one billion...

    Corey T. Callaghan, Luís Borda-de-Água, ... Henrique M. Pereira in Nature Ecology & Evolution
    Article Open access 04 September 2023
  13. Differential Abundance Analysis of Microbiome Data

    Differential abundance analysis (DDA) is an active area in microbiome research. The main goal of DDA is to identify features (i.e., OTUs, ASVs, taxa,...
    Chapter 2023
  14. Zooplankton of Volga River Reservoirs: Structure, Abundance and Dynamics

    Abstract

    The taxonomic structure and spatial distribution of the late-summer zooplankton in the Volga River from the upper Ivankovo Reservoir to the...

    V. I. Lazareva, S. M. Zhdanova, ... E. A. Sokolova in Inland Water Biology
    Article 01 February 2024
  15. Characterizing glucokinase variant mechanisms using a multiplexed abundance assay

    Background

    Amino acid substitutions can perturb protein activity in multiple ways. Understanding their mechanistic basis may pinpoint how residues...

    Sarah Gersing, Thea K. Schulze, ... Rasmus Hartmann-Petersen in Genome Biology
    Article Open access 16 April 2024
  16. Density and abundance estimation of unmarked ungulates using camera traps in the Mudumu National Park, Namibia

    Density and abundance estimates are critical to effective wildlife management and are essential for monitoring population trends and setting...

    LineekelaOmwene T. Nauyoma, Camille H. Warbington, ... Ezequiel C. Fabiano in European Journal of Wildlife Research
    Article Open access 07 March 2024
  17. Bayesian N-Mixture Models Applied to Estimating Insect Abundance

    Estimating animal abundance is an area of interest for many conservationists and population ecologists. When using count data to obtain abundance...
    Niamh Mimnagh, Andrew Parnell, Estevão Prado in Modelling Insect Populations in Agricultural Landscapes
    Chapter 2023
  18. Introduced competitor reduces abundance of an imperiled cottontail

    Introduced species competing with native species can decrease the density and abundance of native species, causing concern for the persistence of...

    Kathryn E. Bischoff, Tracy A. G. Rittenhouse, Chadwick D. Rittenhouse in Biological Invasions
    Article 06 July 2023
  19. Abundance Calculation of Naked and Testate Amoebae from Soil

    Protists in soil perform important functions in the decomposer cycle and plant growth and are valued bioindicators for natural and anthropogenic...
    Protocol 2024
  20. Seasonal abundance of Hyalomma anatolicum tick infesting cattle of coastal Odisha, India

    Hyalomma anatolicum is an economically important ixodid tick infesting cattle all around the globe as it is a vector for bovine tropical theilerosis....

    M. Dehuri, M. R. Panda, ... S. K. Panda in International Journal of Tropical Insect Science
    Article 21 March 2024
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