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Comparison of Databases on Thermodynamic Properties of Individual Substances
AbstractThe modern databases on the thermodynamic properties of individual substances were reviewed to determine applicability of databases for...
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A comparison of approaches to accessing existing biological and chemical relational databases via SPARQL
Current biological and chemical research is increasingly dependent on the reusability of previously acquired data, which typically come from various...
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Software and Databases for Protein–Protein Docking
Protein–protein interactions (PPIs) provide valuable insights for understanding the principles of biological systems and for elucidating causes of... -
Databases for Drug Discovery and Development
Computational drug design and discovery have taken center stage attention during the time of COVID-19. The science community acknowledges the... -
Using Different Spectroscopic Databases to Model the Transfer of Radiation in the Near-IR Range and Retrieve the Content of Methane in the Atmosphere
AbstractAtmospheric solar spectra in the absorption lines of methane in the near-IR range are modeled and compared using spectra measured on a...
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Updates on Databases of Allergens and Allergen-Epitopes
The increasing prevalence of allergic diseases is of great public health concern. Environmental and food allergens are the major triggers of allergic... -
An Investigation of the Toxicity and Mechanisms of Food Additives Based on Network Toxicology and GEO Databases: A Case Study of Aspartame
This study employs network toxicology, molecular docking, and molecular dynamics simulations to assess the characteristics and potential molecular...
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Big Free-Access Chemical Databases in Non-Target Mass Spectrometry Analysis
AbstractThe ChemSpider and PubChem chemical databases used in non-target mass spectrometry analysis in order to outline the candidates for...
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“DompeKeys”: a set of novel substructure-based descriptors for efficient chemical space map**, development and structural interpretation of machine learning models, and indexing of large databases
The conversion of chemical structures into computer-readable descriptors, able to capture key structural aspects, is of pivotal importance in the...
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Combatting over-specialization bias in growing chemical databases
BackgroundPredicting in advance the behavior of new chemical compounds can support the design process of new products by directing the research...
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Databases and Tools for Microbial Genome and Human Microbiome Studies
The term microbe refers to the diverse spectrum of microscopic archaea, bacteria, protist, fungi, and algae, of which some are beneficial, whereas... -
Generation of macro- and microplastic databases by high-throughput FTIR analysis with microplate readers
FTIR spectral identification is today’s gold standard analytical procedure for plastic pollution material characterization. High-throughput FTIR...
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Utilizing Public Molecular Biological Databases for CCN Family Research
Classically, scientific research has been driven by hypotheses based on personal inspiration and intuition against the background of personal... -
Computational Tools and Databases for Fusion Transcripts: Therapeutic Targets in Cancer
In recent years, a rapid expansion in the field of RNAomics has led to a steep rise in data regarding expressed genes. This expansion in data has... -
Databases for Protein–Protein Interactions
Protein–protein interaction networks have a crucial role in biological processes. Proteins perform multiple functions in forming physical and... -
IEDB and CEDAR: Two Sibling Databases to Serve the Global Scientific Community
Various methodologies have been utilized to analyze epitope-specific responses in the context of non-self-antigens, such as those associated with... -
Review on natural products databases: where to find data in 2020
Natural products (NPs) have been the centre of attention of the scientific community in the last decencies and the interest around them continues to...
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Databases with Information on Molecular Structure
Databases containing information on molecular structure are reviewed. The database with numerical data on molecular geometry determined by... -
Protein Secretion Prediction Tools and Extracellular Vesicles Databases
Secreted proteins play important roles in several biological processes such as growth, proliferation differentiation, cell-cell communication,... -
Critical evaluation of MS acquisition conditions and identification process in LC-Q-Orbitrap-MS for non-targeted analysis: pesticide residues as case of study
In routine measurements, the length of analysis time and the number of samples analysed during a given time unit are crucial. Additionally, the...