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Comparative mitochondrial genome analysis reveals a candidate ORF for cytoplasmic male sterility in tropical onion
Cytoplasmic male sterility (CMS) has been widely exploited for hybrid seed production in onions ( Allium cepa L.). In contrast to long-day onion...
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Comparative genome-wide analysis of novel Streptomyces isolates RC1831 and RC1832: deciphering the role of functional carbohydrate (CAZy) active genes including chitinase for production of chitosan
This work compares two bacterial isolates Streptomyces barkulensis RC1831 and Streptomyces chitinovorans RC1832 isolated from Chilika Lake sediments...
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Probiogenomics and Genome Annotation in Bifidobacteria and Lactobacilli
Traditionally, the process of selecting probiotics involved conducting both in vitro and in vivo trials to assess characteristics such as resistance,...
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Applications of Genome Editing in Extremophiles
The member of bacteria, archaea, and eukarya comes under the umbrella of extremophiles. Extremophiles can survive in the extremely harsh conditions...
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Pan-genome Analysis Reveals Comparative Genomic Features of Central Metabolic Pathways in Methylorubrum extorquens
Methylobacterium is a genus belonging to the pink-pigmented facultative methylotrophs, which can use C1 substrates as a sole carbon source. Methylorubr...
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Chloroplast genome skimming of a potential agroforestry species Melia dubia. Cav and its comparative phylogenetic analysis with major Meliaceae members
Melia dubia Cav. is a fast-growing plywood species gaining popularity due to high economic returns. This study aimed to assemble and annotate the...
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Genome-wide identification and comparative analysis of YABBY transcription factors in oil tea and tea tree
The plant-specific transcription factor gene family, YABBY, plays an important role in plant development and stress response. Although YABBY genes...
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Insights into genome plasticity and gene regulation in Orientia tsutsugamushi through genome-wide mining of microsatellite markers
Microsatellite markers are being used for molecular identification and characterization as well as estimation of evolution patterns due to their...
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Comparative genome-wide characterization of salt responsive micro RNA and their targets through integrated small RNA and de novo transcriptome profiling in sugarcane and its wild relative Erianthus arundinaceus
Soil salinity and saline irrigation water are major constraints in sugarcane affecting the production of cane and sugar yield. To understand the...
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Choice of Metric Divergence in Genome Sequence Comparison
The paper introduces a novel probability descriptor for genome sequence comparison, employing a generalized form of Jensen-Shannon divergence. This...
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Genome-wide identification, characterization and primer designing of simple sequence repeats across Leguminosae family
Legumes are important clade of commercially important family Leguminosae that mainly include medicinal, flowering and edible plants. Although the...
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Evolution of Transgenic Technology: From Random Transgenesis to Precise Genome Editing
New techniques in molecular biology help us for better understanding of biological processes. As biologists we resort to powerful approaches for...
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Fig Tree Genome and Diversity
The common fig (Ficus carica L.) is one of the most remarkable fruit species of the Mediterranean area. Its adaptive potentialities to various...
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Exploring Plant-Microbe Interaction Through the Lens of Genome Editing
Dynamic advances in genetic engineering and plant studies leading to unprecedented plant yield have been largely offset by unfettered global...
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Comparative analysis of lipid and flavonoid biosynthesis between Pongamia and soybean seeds: genomic, transcriptional, and metabolic perspectives
BackgroundSoybean ( Glycine max ) is a vital oil-producing crop. Augmenting oleic acid (OA) levels in soybean oil enhances its oxidative stability and...
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Comparative genome analysis of Alkalihalobacillus okhensis Kh10-101 T reveals insights into adaptive mechanisms for halo-alkali tolerance
Alkalihalobacillus okhensis is a halo-alkaliphile with optimal growth at pH 10 and 5% NaCl. Phylogenetic analysis revealed habitat-dependent...
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The Role of Whole-Genome Methods in the Industrial Production of Value-Added Compounds
The rate of microbial genome sequencing has accelerated with the introduction of high-throughput sequencing technologies and pertinent analytical...
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Databases and Tools for Microbial Genome and Human Microbiome Studies
The term microbe refers to the diverse spectrum of microscopic archaea, bacteria, protist, fungi, and algae, of which some are beneficial, whereas...
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Characterization and genome-wide sequence analysis of an ectomycorrhizal fungus Pisolithus albus, a potential source for reclamation of degraded lands
Pisolithus albus is a ubiquitous ectomycorrhizal fungus that establishes symbiosis with a wide range of woody plants around the globe. The symbiotic...
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Minimal Cells and Genome Minimization: Top-Down and Bottom-Up Approaches to Construct Synthetic Cells
Bioproduction of high-value molecules has traditionally been carried out using engineered host cells. However, toxic molecules and membrane proteins...