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Interplay between autotrophic and heterotrophic prokaryotic metabolism in the bathypelagic realm revealed by metatranscriptomic analyses
BackgroundHeterotrophic microbes inhabiting the dark ocean largely depend on the settling of organic matter from the sunlit ocean. However, this...
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Meta-organism gene expression reveals that the impact of nitrate enrichment on coral larvae is mediated by their associated Symbiodiniaceae and prokaryotic assemblages
BackgroundCoral meta-organisms consist of the coral, and its associated Symbiodiniaceae (dinoflagellate algae), bacteria, and other microbes. Corals...
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Using Baker’s Yeast to Determine Functions of Novel Wolbachia (and Other Prokaryotic) Effectors
Yeasts are single-celled eukaryotic organisms classified as fungi, mostly in the phylum Ascomycota. Of about 1500 named species, Saccharomyces...
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Distinctive prokaryotic microbiomes in sympatric plant roots from a Yucatan cenote
ObjectiveCenotes are flooded caves in Mexico’s Yucatan peninsula. Many cenotes are interconnected in an underground network of pools and streams...
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Production of Recombinant Protein Self-Assembly Nanocontainers in a Prokaryotic System
We optimized a method for the preparation and purification of self-assembled protein nanocontainers EPN, the latest achievement in protein...
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Metagenomic insights into the taxonomy, function, and dysbiosis of prokaryotic communities in octocorals
BackgroundIn octocorals (Cnidaria Octocorallia), the functional relationship between host health and its symbiotic consortium has yet to be...
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HumGut: a comprehensive human gut prokaryotic genomes collection filtered by metagenome data
BackgroundA major bottleneck in the use of metagenome sequencing for human gut microbiome studies has been the lack of a comprehensive genome...
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Prokaryotic ribosomal RNA stimulates zebrafish embryonic innate immune system
ObjectivesCell-culture studies reported that prokaryotic RNA molecules among the various microbe-associated molecular patterns (MAMPs) were uniquely...
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Host genetic variation drives the differentiation in the ecological role of the native Miscanthus root-associated microbiome
BackgroundMicrobiome recruitment is influenced by plant host, but how host plant impacts the assembly, functions, and interactions of perennial plant...
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Prokaryotic and Microbial Eukaryotic System for the NP Synthesis
Metal nanosized particles are recognized as the notable category among different nanoparticles that has played wide roles like antimicrobial,...
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Toxicological Evaluation of Nanoparticles Using Prokaryotic Model Organisms
The extensive application of nanoparticle (NP) synthesis and expansion in recent advances in biological and material science have been of...
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Mitochondrially mediated RNA interference, a retrograde signaling system affecting nuclear gene expression
Several functional classes of short noncoding RNAs are involved in manifold regulatory processes in eukaryotes, including, among the best...
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Screening and identification of cyprinid herpesvirus 2 (CyHV-2) ORF55-interacting proteins by phage display
BackgroundCyprinid herpesvirus 2 (CyHV-2) is a pathogenic fish virus belonging to family Alloherpesviridae. The CyHV-2 gene encoding thymidine kinase...
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Global analysis of the biosynthetic chemical space of marine prokaryotes
BackgroundMarine prokaryotes are a rich source of novel bioactive secondary metabolites for drug discovery. Recent genome mining studies have...
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Genome-centric metagenomics reveals the host-driven dynamics and ecological role of CPR bacteria in an activated sludge system
BackgroundCandidate phyla radiation (CPR) constitutes highly diverse bacteria with small cell sizes and are likely obligate intracellular symbionts....
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An Exhaustive Structural Scrutiny and Initial Functional Appraisal of the Yak SLC11A1 Gene
AbstractAnimal diseases pose significant impediments to the flourishing of the animal husbandry sector, due to the role of solute transport protein...
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Presence and role of viruses in anaerobic digestion of food waste under environmental variability
BackgroundThe interaction among microorganisms in the anaerobic digestion of food waste (ADFW) reactors lead to the degradation of organics and the...
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Symbiogenetics and Symbiogenesis: The Molecular and Ecological Bases of Integrative Evolution
Symbiogenetics is presented as a discipline that studies the combined genetic systems that result from co-evolution of unrelated organisms. Their...
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Bacterial origins of human cell-autonomous innate immune mechanisms
The cell-autonomous innate immune system enables animal cells to resist viral infection. This system comprises an array of sensors that, after...
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Seasonal patterns in microbial carbon and iron transporter expression in the Southern Ocean
BackgroundHeterotrophic microbes in the Southern Ocean are challenged by the double constraint of low concentrations of organic carbon (C) and iron...
