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  1. Article

    Open Access

    Genomic and phenotypic analysis of a novel clinical isolate of Corynebacterium pyruviciproducens

    Corynebacterium pyruviciproducens is a recently described species of Corynebacterium. There are few reports on the microbiological characteristics of the new species, and there is a lack of reports on the genomic...

    Jiaqi Wang, Jiajia Feng, Wei Jia, Tingxun Yuan, **nyu He, Qianqian Wu in BMC Microbiology (2023)

  2. No Access

    Article

    Nanoparticle (NP)-mediated APOC1 silencing to inhibit MAPK/ERK and NF-κB pathway and suppress breast cancer growth and metastasis

    Breast cancer is one of the most common malignant tumors with high mortality and poor prognosis in women. There is an urgent need to discover new therapeutic targets for breast cancer metastasis. Herein, we id...

    Shaomin Liu, Fengqian Zhang, Yixia Liang, Guo Wu, Rong Liu in Science China Life Sciences (2023)

  3. Article

    Open Access

    The energy metabolism of Balantidium polyvacuolum inhabiting the hindgut of Xenocypris davidi

    Anaerobic parasitic ciliates are a specialized group of ciliates that are adapted to anoxic and oxygen-depleted habitats. Among them, Balantidium polyvacuolum, which inhabits the hindgut of Xenocyprinae fishes, h...

    **a-lian Bu, Wei-shan Zhao, Zhong-yang Li, Hong-wei Ma, Yu-shun Chen in BMC Genomics (2023)

  4. Article

    Open Access

    miR-30e-5p-mediated FOXD1 promotes cell proliferation by blocking cellular senescence and apoptosis through p21/CDK2/Rb signaling in head and neck carcinoma

    Forkhead box D1 (FOXD1) belongs to the FOX protein family, which has been found to function as a oncogene in multiple cancer types, but its role in head and neck squamous cell carcinoma (HNSCC) requires furthe...

    Tong Wu, Zhongyuan Yang, Weichao Chen, Mingjie Jiang, Zhichao **ao in Cell Death Discovery (2023)

  5. No Access

    Article

    Discovery of a selective NLRP3-targeting compound with therapeutic activity in MSU-induced peritonitis and DSS-induced acute intestinal inflammation

    The aberrant activation of the nucleotide-binding oligomerization domain-like receptor family pyrin domain containing 3 (NLRP3) inflammasome is known to contribute to the pathogenesis of various human inflamma...

    Yinghua Zhou, Zhong** Yang, Yitao Ou, Haowei Cai in Cellular and Molecular Life Sciences (2023)

  6. No Access

    Article

    De novo transcriptome analyses reveal multiple metabolic pathways for L-ascorbic acid biosynthesis under drought stress in Pugionium cornutum (L.) Gaertn

    Pugionium cornutum (L.) Gaertn., a member of the Brassicaceae family, is a plant that has been used as traditional Chinese medicine and is consumed as a vegetable rich in L-ascorbic acid(AsA). To identify candida...

    Zhongren Yang, **aoyan Zhang, Fenglan Zhang in Journal of Plant Biochemistry and Biotechn… (2022)

  7. No Access

    Article

    Flavonoid production and antioxidative activity in liquid-cultured hairy roots of Apocynum venetum

    Apocynum venetum is a traditional and popular Chinese herb used for medicine and tea, and its major bioactive components is flavonoid. This study aimed to analyze the flavonoid production and antioxidative activi...

    Lixiang Zhang, Zhong Yang Yu, Haiyan Wang in Journal of Plant Biochemistry and Biotechn… (2022)

  8. Article

    Open Access

    TMT-based proteomic analysis of liquorice root in response to drought stress

    Drought stress is a serious threat to land use efficiency and crop yields worldwide. Understanding the mechanisms that plants use to withstand drought stress will help breeders to develop drought-tolerant medi...

    Dong Zhang, Zhongren Yang, **aoqing Song, Fenglan Zhang, Yan Liu in BMC Genomics (2022)

  9. Article

    Open Access

    Med23 supports angiogenesis and maintains vascular integrity through negative regulation of angiopoietin2 expression

    The mammalian Mediator complex consists of over 30 subunits and functions as a transcriptional hub integrating signaling for tissue-specific gene expression. Although the role of the Mediator complex in transc...

    Yenan Yang, Qi **ao, **gwen Yin, Chonghui Li, Decai Yu in Communications Biology (2022)

  10. Article

    Open Access

    Antibiotic resistance genes in gut of breast-fed neonates born by caesarean section originate from breast milk and hospital ward air

    The human gut is a reservoir of antibiotic resistance genes (ARGs). Even in the absence of antibiotics, ARGs are present in large quantities in faeces of adults, children and even newborns. However, where and ...

    Kunming Zhang, Min **, Dong Yang, Zhiqiang Shen, Weili Liu, **g Yin in BMC Microbiology (2022)

  11. No Access

    Article

    Feature Selection Optimization for Mahalanobis-Taguchi System Using Chaos Quantum-Behavior Particle Swarm

    The computational speed in the feature selection of Mahalanobis-Taguchi system (MTS) using standard binary particle swarm optimization (BPSO) is slow and it is easy to fall into the locally optimal solution. T...

    Jiufu Liu 刘久富, Rui Zheng 郑锐 in Journal of Shanghai Jiaotong University (S… (2021)

  12. Article

    Open Access

    Knockout RAGE alleviates cardiac fibrosis through repressing endothelial-to-mesenchymal transition (EndMT) mediated by autophagy

    Endothelial-to-mesenchymal transition (EndMT) has been shown to contribute to cardiac fibrosis and heart failure (HF). Recent studies have demonstrated that EndMT is regulated by autophagy, and we previously s...

    Lu Zhang, Jiaqi He, Junyan Wang, **g Liu, Zixin Chen, Bo Deng in Cell Death & Disease (2021)

  13. Article

    Open Access

    PEDF inhibits lymphatic metastasis of nasopharyngeal carcinoma as a new lymphangiogenesis inhibitor

    Nasopharyngeal carcinoma (NPC) is one of the most malignant tumors in southern China and Asia, and lymph node metastasis is an important cause for treatment failure. Lymphangiogenesis is a crucial step in lymp...

    Chuanghua Luo, Haofan Yin, Tianxiao Gao, Caiqi Ma, Junxi Liu in Cell Death & Disease (2021)

  14. Article

    Open Access

    Genome-wide identification, characterization, and expression analysis of the NAC transcription factor family in orchardgrass (Dactylis glomerata L.)

    Orchardgrass (Dactylis glomerata L.) is one of the most important cool-season perennial forage grasses that is widely cultivated in the world and is highly tolerant to stressful conditions. However, little is kno...

    Zhongfu Yang, Gang Nie, Guangyan Feng, Jiating Han, Linkai Huang in BMC Genomics (2021)

  15. No Access

    Article

    A lux-based Staphylococcus aureus bioluminescence screening assay for the detection/identification of antibiotics and prediction of antibiotic mechanisms

    The need for the discovery of new antibiotics and solving the antibiotic resistance problem requires rapid detection of antibiotics, identification of known antibiotics, and prediction of antibiotic mechanisms...

    Zhongjun Yang, Qingyu Cui, Mengge Zhang, Zhiqiang Li in The Journal of Antibiotics (2020)

  16. Article

    Open Access

    Pyroptosis and ferroptosis induced by mixed lineage kinase 3 (MLK3) signaling in cardiomyocytes are essential for myocardial fibrosis in response to pressure overload

    Chronic heart failure (CHF) is the final outcome of many cardiovascular diseases, and is a severe health issue faced by the elderly population. Mixed lineage kinase 3 (MLK3), a member of MAP3K family, is assoc...

    Junyan Wang, Bo Deng, Qing Liu, Yusheng Huang, Weitao Chen, **g Li in Cell Death & Disease (2020)

  17. No Access

    Article

    Multiplex genome editing using a dCas9-cytidine deaminase fusion in Streptomyces

    CRISPR/Cas-mediated genome editing has greatly facilitated the study of gene function in Streptomyces. However, it could not be efficiently employed in streptomycetes with low homologous recombination (HR) abilit...

    Yawei Zhao, **zhong Tian, Guosong Zheng, Jun Chen in Science China Life Sciences (2020)

  18. Article

    Open Access

    The contrary intracellular and extracellular functions of PEDF in HCC development

    Pigment epithelium-derived factor (PEDF), a classic angiogenic inhibitor, has been reported to function as a tumor suppression protein and to downregulate in many types of solid tumors. However, the expression...

    Cen Li, Zhijian Huang, Liuqing Zhu, **anhuan Yu, Tianxiao Gao in Cell Death & Disease (2019)

  19. No Access

    Article

    A meta-analysis of 1,119 manipulative experiments on terrestrial carbon-cycling responses to global change

    Direct quantification of terrestrial biosphere responses to global change is crucial for projections of future climate change in Earth system models. Here, we synthesized ecosystem carbon-cycling data from 1,1...

    Jian Song, Shiqiang Wan, Shilong Piao, Alan K. Knapp in Nature Ecology & Evolution (2019)

  20. Article

    Open Access

    Construction and analysis of degradome-dependent microRNA regulatory networks in soybean

    Usually the microRNA (miRNA)-mediated gene regulatory network (GRN) is constructed from the investigation of miRNA expression profiling and target predictions. However, the higher/lower expression level of miR...

    Rui Wang, Zhongyi Yang, Yuhan Fei, Jiejie Feng, Hui Zhu, Fang Huang in BMC Genomics (2019)

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