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Transcriptome sequencing of the endangered land snail Karaftohelix adamsi from the Island Ulleung: De novo assembly, annotation, valuation of fitness genes and SSR markers

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  1. Article

    Open Access

    Exogenous methyl jasmonate mediates tolerance of heat stress in Korean fir (Abies koreana)

    Heat stress is a major environmental stress that affects the growth and development of plants. Korean fir (Abies koreana), a rare species endemic to South Korea, is sensitive to global climate change. The effect ...

    Da Young Lee, Da Young Park, Hyeong Cheol Park in Plant Biotechnology Reports (2024)

  2. Article

    Open Access

    Elucidating the callus-to-shoot-forming mechanism in Capsicum annuum ‘Dempsey’ through comparative transcriptome analyses

    The formation of shoots plays a pivotal role in plant organogenesis and productivity. Despite its significance, the underlying molecular mechanism of de novo regeneration has not been extensively elucidated in Ca...

    Sang-Yun Han, So Young Park, Kang-Hee Won, Sung-il Park in BMC Plant Biology (2024)

  3. Article

    Open Access

    Hippo–YAP/TAZ signalling coordinates adipose plasticity and energy balance by uncoupling leptin expression from fat mass

    Adipose tissues serve as an energy reservoir and endocrine organ, yet the mechanisms that coordinate these functions remain elusive. Here, we show that the transcriptional coregulators, YAP and TAZ, uncouple f...

    Sungwoo Choi, Ju-Gyeong Kang, Yen T. H. Tran, Sun-Hye Jeong in Nature Metabolism (2024)

  4. Article

    Open Access

    The effect of data transformation on low-dimensional integration of single-cell RNA-seq

    Recent developments in single-cell RNA sequencing have opened up a multitude of possibilities to study tissues at the level of cellular populations. However, the heterogeneity in single-cell sequencing data ne...

    Youngjun Park, Anne-Christin Hauschild in BMC Bioinformatics (2024)

  5. Article

    Open Access

    Oral ulcer treatment using human tonsil-derived mesenchymal stem cells encapsulated in trimethyl chitosan hydrogel: an animal model study

    Oral ulcers are a common side effect of chemotherapy and affect patients’ quality of life. While stem cell transplantation is a potential treatment for oral ulcers, its efficacy is limited as the stem cells te...

    Hyun Seok Ryu, Celine Abueva, Andrew Padalhin in Stem Cell Research & Therapy (2024)

  6. Article

    Open Access

    Irreversible HER2 inhibitors overcome resistance to the RSL3 ferroptosis inducer in non-HER2 amplified luminal breast cancer

    Ferroptosis, a form of programed cell death, can be promoted by inhibitors of the xCT transporter (erastin) or GPX4 (RSL3). We found that GPX4, but not the xCT transporter, is selectively elevated in luminal b...

    Soon Young Park, Kang ** Jeong, Alfonso Poire, Dong Zhang in Cell Death & Disease (2023)

  7. Article

    Open Access

    Transcriptome analysis of the endangered dung beetle Copris tripartitus (Coleoptera: Scarabaeidae) and characterization of genes associated to immunity, growth, and reproduction

    Dung beetles recycle organic matter through the decomposition of feces and support ecological balance. However, these insects are threatened by the indiscriminate use of agrochemicals and habitat destruction. Cop...

    Hee Ju Hwang, Bharat Bhusan Patnaik, Snigdha Baliarsingh in BMC Genomics (2023)

  8. Article

    Open Access

    Implantation and tracing of green fluorescent protein-expressing adipose-derived stem cells in peri-implant capsular fibrosis

    Adipose-derived stem cells (ASCs) have been reported to reduce fibrosis in various tissues. In this study, we investigated the inhibitory role of ASCs on capsule formation by analyzing the histologic, cellular...

    Bo-Yoon Park, Dirong Wu, Kyoo-Ri Kwon, Mi-** Kim in Stem Cell Research & Therapy (2023)

  9. Article

    Open Access

    Splicing factor SRSF3 represses translation of p21cip1/waf1 mRNA

    Serine/arginine-rich splicing factor 3 (SRSF3) is an RNA binding protein that most often regulates gene expression at the splicing level. Although the role of SRSF3 in mRNA splicing in the nucleus is well know...

    Jeeho Kim, Ra Young Park, Younghoon Kee, Sunjoo Jeong, Takbum Ohn in Cell Death & Disease (2022)

  10. Article

    Open Access

    The globalizability of temporal discounting

    Economic inequality is associated with preferences for smaller, immediate gains over larger, delayed ones. Such temporal discounting may feed into rising global inequality, yet it is unclear whether it is a fu...

    Kai Ruggeri, Amma Panin, Milica Vdovic, Bojana Većkalov in Nature Human Behaviour (2022)

  11. Article

    Erratum to: A split face study on the effect of an anti-acne product containing fermentation products of Enterococcus faecalis CBT SL-5 on skin microbiome modification and acne improvement

    Hye Sung Han, Sun Hye Shin, Bo-Yun Choi, Nayeon Koo in Journal of Microbiology (2022)

  12. Article

    Open Access

    Hydrochloric acid-treated Bacillus subtilis ghosts induce IL-1 beta, IL-6, and TNF-alpha in murine macrophage

    Bacterial ghosts (BGs) are empty cell envelopes commonly generated using Gram-negative bacteria; they represent a potential platform for efficient adjuvant and vaccine delivery systems. However, the efficient ...

    Young-Min Kim, Kwang-Su Lee, Won-Mun Kim, Min Kim in Molecular & Cellular Toxicology (2022)

  13. Article

    Open Access

    ARL6IP5 reduces cisplatin-resistance by suppressing DNA repair and promoting apoptosis pathways in ovarian carcinoma

    Ovarian carcinoma (OC) is the most lethal gynecological malignancy due to frequent recurrence resulting from cisplatin-resistance. ARL6IP5 is a novel gene implicated to suppress cisplatin-resistance by activating...

    Ji-Ye Kim, Entaz Bahar, Jung-Yun Lee, Sunhee Chang, Se Hoon Kim in Cell Death & Disease (2022)

  14. Article

    Open Access

    Genome structure and diversity among Cynanchum wilfordii accessions

    Cynanchum wilfordii (Cw) and Cynanchum auriculatum (Ca) have long been used in traditional medicine and as functional food in Korea and China, respectively. They have diverse medicinal functions, and many studies...

    Sae Hyun Lee, Jiseok Kim, Hyun-Seung Park, Hyun** Koo in BMC Plant Biology (2022)

  15. Article

    Open Access

    Activation of the EGFR-PI3K-CaM pathway by PRL-1-overexpressing placenta-derived mesenchymal stem cells ameliorates liver cirrhosis via ER stress-dependent calcium

    Cholesterol accumulation and calcium depletion induce hepatic injury via the endoplasmic reticulum (ER) stress response. ER stress regulates the calcium imbalance between the ER and mitochondria. We previously...

    Se Ho Kim, Jae Yeon Kim, Soo Young Park, Won Tae Jeong in Stem Cell Research & Therapy (2021)

  16. Article

    Open Access

    Taxonomy-based data representation for data mining: an example of the magnitude of risk associated with H. pylori infection

    The amount of available and potentially significant data describing study subjects is ever growing with the introduction and integration of different registries and data banks. The single specific attribute of...

    Inese Polaka, Danute Razuka-Ebela, ** Young Park, Marcis Leja in BioData Mining (2021)

  17. Article

    Open Access

    Comparative perianal fistula closure rates following autologous adipose tissue-derived stem cell transplantation or treatment with anti-tumor necrosis factor agents after seton placement in patients with Crohn’s disease: a retrospective observational study

    Perianal fistula is one of the most common complications in Crohn’s disease, and various medical and surgical treatments are being tried. The aim of this study was to compare the perianal fistula closure rates...

    Min Young Park, Yong Sik Yoon, Jong Lyul Lee in Stem Cell Research & Therapy (2021)

  18. Article

    Correction to: A Novel Method to Differentiate Tonsil-Derived Mesenchymal Stem Cells In Vitro into Estrogen-Secreting Cells

    The author would like to correct the fifth, seventh and eighth co-authors’ name to Kyung-Ah Cho, Han Su Kim, Bo Young Park in the online published article.

    Hee-Yeon Kim, Younghay Lee, Hee-Soo Yoon in Tissue Engineering and Regenerative Medici… (2021)

  19. Article

    Correction to: The ten amino acids of the oxygen-evolving enhancer of tobacco is sufficient as the peptide residues for protein transport to the chloroplast thylakoid

    In the above mentioned publication, Figure 5 was a duplicate of Figure 4. The original article has been corrected and the proper version of Figure 5 is also published here.

    Sang Hoon Ma, Hyun Min Kim, Se Hee Park, Seo Young Park in Plant Molecular Biology (2021)

  20. Article

    Open Access

    The ten amino acids of the oxygen-evolving enhancer of tobacco is sufficient as the peptide residues for protein transport to the chloroplast thylakoid

    The thylakoid transit peptide of tobacco oxygen-evolving enhancer protein contains a minimal ten amino acid sequences for thylakoid lumen transports. This ten amino acids do not contain twin-arginine, which is...

    Sang Hoon Ma, Hyun Min Kim, Se Hee Park, Seo Young Park in Plant Molecular Biology (2021)

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