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  1. Article

    Open Access

    Motif-based community detection in heterogeneous multilayer networks

    Multilayer networks composed of intralayer edges and interlayer edges are an important type of complex networks. Considering the heterogeneity of nodes and edges, it is necessary to design more reasonable and ...

    Yafang Liu, Aiwen Li, An Zeng, Jianlin Zhou, Ying Fan, Zengru Di in Scientific Reports (2024)

  2. Article

    Open Access

    Integrative analysis of single-cell and bulk RNA-sequencing data revealed T cell marker genes based molecular sub-types and a prognostic signature in lung adenocarcinoma

    Immunotherapy has emerged as a promising modality for addressing advanced or conventionally drug-resistant malignancies. When it comes to lung adenocarcinoma (LUAD), T cells have demonstrated significant influ...

    Yueling Peng, Yafang Dong, Qihui Sun, Yue Zhang, **angyang Zhou in Scientific Reports (2024)

  3. Article

    Open Access

    Network pharmacology-based research on the effect of Radix Astragali on osteosarcoma and the underlying mechanism

    To explore the anti-tumor effects of Radix Astragali on osteosarcoma and its mechanism. We analyzed the PPI network of Radix Astragali’s potential targets for treating osteosarcoma and got the hub targets. We ...

    Yafang Zhang, Junqiang Wei, Lingwei Kong, Mingze Song, Yange Zhang in Scientific Reports (2023)

  4. Article

    Open Access

    Dynamic redox and nutrient cycling response to climate forcing in the Mesoproterozoic ocean

    Controls on Mesoproterozoic ocean redox heterogeneity, and links to nutrient cycling and oxygenation feedbacks, remain poorly resolved. Here, we report ocean redox and phosphorus cycling across two high-resolu...

    Yafang Song, Fred T. Bowyer, Benjamin J. W. Mills in Nature Communications (2023)

  5. Article

    Open Access

    Molecular insights into Spindlin1-HBx interplay and its impact on HBV transcription from cccDNA minichromosome

    Molecular interplay between host epigenetic factors and viral proteins constitutes an intriguing mechanism for sustaining hepatitis B virus (HBV) life cycle and its chronic infection. HBV encodes a regulatory ...

    Wei Liu, Qiyan Yao, **aonan Su, Yafang Deng, Mo Yang, Bo Peng in Nature Communications (2023)

  6. Article

    Open Access

    Accelerating the solar-thermal energy storage via inner-light supplying with optical waveguide

    Solar-thermal storage with phase-change material (PCM) plays an important role in solar energy utilization. However, most PCMs own low thermal conductivity which restricts the thermal charging rate in bulk sam...

    Yafang Zhang, Jiebin Tang, Jialin Chen, Yuhai Zhang in Nature Communications (2023)

  7. Article

    Open Access

    Unified theoretical framework for black carbon mixing state allows greater accuracy of climate effect estimation

    Black carbon (BC) plays an important role in the climate system because of its strong warming effect, yet the magnitude of this effect is highly uncertain owing to the complex mixing state of aerosols. Here we...

    Jiandong Wang, Jia** Wang, Runlong Cai, Chao Liu, **gkun Jiang in Nature Communications (2023)

  8. Article

    Open Access

    Expansion of human megakaryocyte-biased hematopoietic stem cells by biomimetic Microniche

    Limited numbers of available hematopoietic stem cells (HSCs) limit the widespread use of HSC-based therapies. Expansion systems for functional heterogenous HSCs remain to be optimized. Here, we present a conve...

    Yinghui Li, Mei He, Wenshan Zhang, Wei Liu, Hui Xu, Ming Yang in Nature Communications (2023)

  9. Article

    Open Access

    Pivotal models and biomarkers related to the prognosis of breast cancer based on the immune cell interaction network

    The effect of breast cancer heterogeneity on prognosis of patients is still unclear, especially the role of immune cells in prognosis of breast cancer. In this study, single cell transcriptome sequencing data ...

    Rui Liu, **n Yang, Yuhang Quan, Yiyin Tang, Yafang Lai, Maohua Wang in Scientific Reports (2022)

  10. Article

    Open Access

    Subversion of GBP-mediated host defense by E3 ligases acquired during Yersinia pestis evolution

    Plague has caused three worldwide pandemics in history, including the Black Death in medieval ages. Yersinia pestis, the etiological agent of plague, has evolved a powerful arsenal to disrupt host immune defenses...

    Shiyang Cao, Yang Jiao, Wei Jiang, Yarong Wu, Si Qin, Yifan Ren in Nature Communications (2022)

  11. Article

    Open Access

    The value of Ki67 for the diagnosis of LSIL and the problems of p16 in the diagnosis of HSIL

    p16 and Ki67 are immunohistochemical markers related to cervical squamous intraepithelial lesions. p16 has been widely used to assist in the diagnosis of high-grade squamous intraepithelial lesions. However, a...

    Jixuan Liu, Sanmei Su, Yafang Liu in Scientific Reports (2022)

  12. Article

    Open Access

    Aerosol-boundary-layer-monsoon interactions amplify semi-direct effect of biomass smoke on low cloud formation in Southeast Asia

    Low clouds play a key role in the Earth-atmosphere energy balance and influence agricultural production and solar-power generation. Smoke aloft has been found to enhance marine stratocumulus through aerosol-cl...

    Ke Ding, **n Huang, Aijun Ding, Minghuai Wang, Hang Su in Nature Communications (2021)

  13. Article

    Open Access

    The expression and significance of AKR1B10 in laryngeal squamous cell carcinoma

    Aldosterone reductase family 1 member B10 (AKR1B10) is a nicotinamide adenine dinucleotide phosphate (reduced coenzyme II)-dependent oxidoreductase, and its biological functions include carbonyl detoxification...

    Jixuan Liu, Hongyan Ban, Yafang Liu, **song Ni in Scientific Reports (2021)

  14. Article

    Open Access

    COVID-19 patients with hypertension are at potential risk of worsened organ injury

    In less than 6 months, COVID-19 spread rapidly around the world and became a global health concern. Hypertension is the most common chronic disease in COVID-19 patients, but its impact on these patients has no...

    Fei **a, Mingwei Zhang, Bo Cui, Wei An, Min Chen, ** Yang, Tao Qin in Scientific Reports (2021)

  15. Article

    Open Access

    REV7 is required for processing AID initiated DNA lesions in activated B cells

    Activation-induced cytidine deaminase (AID) initiates both antibody class switch recombination (CSR) and somatic hypermutation (SHM) in antibody diversification. DNA double-strand break response (DSBR) factors...

    Dingpeng Yang, Ying Sun, **g**g Chen, Ying Zhang in Nature Communications (2020)

  16. Article

    Open Access

    Robust closed-loop control of spike-and-wave discharges in a thalamocortical computational model of absence epilepsy

    In this paper, we investigate the abatement of spike-and-wave discharges in a thalamocortical model using a closed-loop brain stimulation method. We first explore the complex states and various transitions in ...

    Yafang Ge, Yuzhen Cao, Guosheng Yi, Chunxiao Han, Yingmei Qin in Scientific Reports (2019)

  17. Article

    Open Access

    Acute kidney injury in cancer patients: A nationwide survey in China

    Cancer patients have a high risk for acute kidney injury (AKI); however, the incidence, severity, and risk factors of malignancy-related AKI (MR-AKI) are unclear. This study aimed to assess MR-AKI risk factors...

    Juan **, Yafang Wang, Quanquan Shen, Jianguang Gong, Li Zhao in Scientific Reports (2019)

  18. Article

    Open Access

    Fine map** of MHC region in lung cancer highlights independent susceptibility loci by ethnicity

    The basis for associations between lung cancer and major histocompatibility complex genes is not completely understood. Here the authors further consider genetic variation within the MHC region in lung cancer ...

    Aida Ferreiro-Iglesias, Corina Lesseur, James McKay in Nature Communications (2018)

  19. Article

    Open Access

    Identification of susceptibility pathways for the role of chromosome 15q25.1 in modifying lung cancer risk

    Genome-wide association studies (GWAS) identified the chromosome 15q25.1 locus as a leading susceptibility region for lung cancer. However, the pathogenic pathways, through which susceptibility SNPs within chr...

    Xuemei Ji, Yohan Bossé, Maria Teresa Landi, Jiang Gui in Nature Communications (2018)

  20. Article

    Open Access

    Effect of Qiangji Jianli decoction on mitochondrial respiratory chain activity and expression of mitochondrial fusion and fission proteins in myasthenia gravis rats

    Myasthenia gravis (MG) is an autoimmune neuromuscular disease characterized by the production of antibodies against acetylcholine receptors (AChRs). Qiangji Jianli (QJJL) decoction is an effective traditional ...

    **gwei Song, **aowen Lei, Wei Jiao, Yafang Song, Wei**g Chen in Scientific Reports (2018)

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