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Article
Open AccessDiversity in bread and durum wheat stigma morphology and linkage of increased stigma length to dwarfing gene Rht14
The dwarfing allele Rht14 of durum wheat associates with greater stigma length, an important trait for hybrid breeding, whilst major dwarfing alleles Rht-B1b and Rht-D1b showed little to no effect.
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Article
Open AccessNested association map**-based GWAS for grain yield and related traits in wheat grown under diverse Australian environments
Utilising a nested association map** (NAM) population-based GWAS, 98 stable marker-trait associations with 127 alleles unique to the exotic parents were detected for grain yield and related traits in wheat.
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Article
Open AccessA targeted bioinformatics approach identifies highly variable cell surface proteins that are unique to Glomeromycotina
Diversity in arbuscular mycorrhizal fungi (AMF) contributes to biodiversity and resilience in natural environments and healthy agricultural systems. Functional complementarity exists among species of AMF in sy...
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Open AccessCorrection to: QTL analysis and fine map** of a QTL for yield‑related traits in wheat grown in dry and hot environments
A correction to this paper has been published: https://doi.org/10.1007/s00122-021-03792-4
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Article
Open AccessPh2 encodes the mismatch repair protein MSH7-3D that inhibits wheat homoeologous recombination
Meiotic recombination is a critical process for plant breeding, as it creates novel allele combinations that can be exploited for crop improvement. In wheat, a complex allohexaploid that has a diploid-like beh...
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Article
Open AccessQTL analysis and fine map** of a QTL for yield-related traits in wheat grown in dry and hot environments
Genetic control of grain yield and phenology was examined in the Excalibur/Kukri doubled haploid map** population grown in 32 field experiments across the climatic zones of southern Australia, India and nort...
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Article
Open AccessGenome-wide identification and characterization of the GDP-L-galactose phosphorylase gene family in bread wheat
Ascorbate is a powerful antioxidant in plants and an essential micronutrient for humans. The GDP-L-galactose phosphorylase (GGP) gene encodes the rate-limiting enzyme of the L-galactose pathway—the dominant ascor...
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Article
Open AccessgRNA validation for wheat genome editing with the CRISPR-Cas9 system
The CRISPR-Cas9 system is a powerful and versatile tool for crop genome editing. However, achieving highly efficient and specific editing in polyploid species can be a challenge. The efficiency and specificity...
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Article
Open AccessOpposite fates of the purine metabolite allantoin under water and nitrogen limitations in bread wheat
Degradation of nitrogen-rich purines is tightly and oppositely regulated under drought and low nitrogen supply in bread wheat. Allantoin is a key target metabolite for improving nitrogen homeostasis under stress.
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Article
Open AccessDAWN: a resource for yielding insights into the diversity among wheat genomes
Democratising the growing body of whole genome sequencing data available for Triticum aestivum (bread wheat) has been impeded by the lack of a genome reference and the large computational requirements for analysi...
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Article
Open AccessWheat TaMs1 is a glycosylphosphatidylinositol-anchored lipid transfer protein necessary for pollen development
In flowering plants, lipid biosynthesis and transport within anthers is essential for male reproductive success. TaMs1, a dominant wheat fertility gene located on chromosome 4BS, has been previously fine mapped a...
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Article
Open AccessGenome-wide identification and analysis of non-specific Lipid Transfer Proteins in hexaploid wheat
Non-specific Lipid Transfer Proteins (nsLTPs) are involved in numerous biological processes. To date, only a fraction of wheat (Triticum aestivum L.) nsLTPs (TaLTPs) have been identified, and even fewer have been...
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Article
Open AccessOptical and physical map** with local finishing enables megabase-scale resolution of agronomically important regions in the wheat genome
Numerous scaffold-level sequences for wheat are now being released and, in this context, we report on a strategy for improving the overall assembly to a level comparable to that of the human genome.
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Article
Open AccessAllelic variants of OsSUB1A cause differential expression of transcription factor genes in response to submergence in rice
Flooding during seasonal monsoons affects millions of hectares of rice-cultivated areas across Asia. Submerged rice plants die within a week due to lack of oxygen, light and excessive elongation growth to esca...
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Article
Open AccessPOTAGE: A Visualisation Tool for Speeding up Gene Discovery in Wheat
POPSEQ Ordered Triticum aestivum Gene Expression (POTAGE) is a web application which accelerates the process of identifying candidate genes for quantitative trait loci (QTL) in hexaploid wheat. This is achieved b...
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Open AccessMolecular identification of the wheat male fertility gene Ms1 and its prospects for hybrid breeding
The current rate of yield gain in crops is insufficient to meet the predicted demands. Capturing the yield boost from heterosis is one of the few technologies that offers rapid gain. Hybrids are widely used fo...
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Article
Open AccessShoot chloride exclusion and salt tolerance in grapevine is associated with differential ion transporter expression in roots
Salt tolerance in grapevine is associated with chloride (Cl−) exclusion from shoots; the rate-limiting step being the passage of Cl− between the root symplast and xylem apoplast. Despite an understanding of the p...
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Article
Open AccessSequencing error correction without a reference genome
Next (second) generation sequencing is an increasingly important tool for many areas of molecular biology, however, care must be taken when interpreting its output. Even a low error rate can cause a large numb...
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Article
Open AccessTranscriptome-scale homoeolog-specific transcript assemblies of bread wheat
Bread wheat is one of the world’s most important food crops and considerable efforts have been made to develop genomic resources for this species. This includes an on-going project by the International Wheat G...
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Article
Open AccessDiscovery of barley miRNAs through deep sequencing of short reads
MicroRNAs are important components of the regulatory network of biological systems and thousands have been discovered in both animals and plants. Systematic investigations performed in species with sequenced g...