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  1. Article

    Open Access

    Correction: Kinome and phosphoproteome reprogramming underlies the aberrant immune responses in critically ill COVID-19 patients

    Tomonori Kaneko, Sally Ezra, Rober Abdo, Courtney Voss in Clinical Proteomics (2024)

  2. Article

    Open Access

    Kinome and phosphoproteome reprogramming underlies the aberrant immune responses in critically ill COVID-19 patients

    SARS-CoV-2 infection triggers extensive host immune reactions, leading to severe diseases in certain individuals. However, the molecular basis underlying the excessive yet non-productive immune responses in se...

    Tomonori Kaneko, Sally Ezra, Rober Abdo, Courtney Voss in Clinical Proteomics (2024)

  3. Article

    Open Access

    The spatial transcriptomic landscape of non-small cell lung cancer brain metastasis

    Brain metastases (BrMs) are a common occurrence in lung cancer with a dismal outcome. To understand the mechanism of metastasis to inform prognosis and treatment, here we analyze primary and metastasized tumor...

    Qi Zhang, Rober Abdo, Cristiana Iosef, Tomonori Kaneko in Nature Communications (2022)

  4. Article

    Open Access

    Proteome and phosphoproteome signatures of recurrence for HPV+ head and neck squamous cell carcinoma

    Head and neck squamous cell carcinoma (HNSCC) is the sixth most common cancer worldwide and the human papillomavirus (HPV+)-driven subtype is the fastest rising cancer in North America. Although most cases of HPV

    Tomonori Kaneko, Peter Y. F. Zeng, Xuguang Liu, Rober Abdo in Communications Medicine (2022)

  5. No Access

    Article

    Changing pattern of tumor markers in recurrent colorectal cancer patients before surgery to recurrence: serum p53 antibodies, CA19-9 and CEA

    The clinical impact of monitoring serum p53 antibodies, carbohydrate antigen19-9, and carcinoembryonic antigen in patients with colorectal cancer has not been fully evaluated.

    Mitsunori Ushigome, Hideaki Shimada in International Journal of Clinical Oncology (2020)

  6. Article

    Open Access

    Identification and characterization of a large family of superbinding bacterial SH2 domains

    Src homology 2 (SH2) domains play a critical role in signal transduction in mammalian cells by binding to phosphorylated Tyr (pTyr). Apart from a few isolated cases in viruses, no functional SH2 domain has bee...

    Tomonori Kaneko, Peter J. Stogios, **ang Ruan, Courtney Voss in Nature Communications (2018)

  7. No Access

    Protocol

    Creation of Phosphotyrosine Superbinders by Directed Evolution of an SH2 Domain

    Commercial antibodies raised against phosphotyrosine have been widely used as reagents to detect or isolate tyrosine-phosphorylated proteins from cellular samples. However, these antibodies are costly and are ...

    Haiming Huang, Tomonori Kaneko, Sachdev S. Sidhu, Shawn S. C. Li in SH2 Domains (2017)

  8. No Access

    Article

    Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder

    A SH2-domain-derived superbinder that exhibits strong affinity for phosphotyrosine (pTyr) was used in conjugation with mass spectroscopy approaches to enrich and enable identification of pTyr sites in differen...

    Yangyang Bian, Lei Li, Mingming Dong, Xuguang Liu in Nature Chemical Biology (2016)

  9. Article

    Open Access

    Erratum: A phosphorylation switch controls the spatiotemporal activation of Rho GTPases in directional cell migration

    Nature Communications 6: Article number: 7721 (2015); Published 13 July 2015; Updated 8 September 2015 The image in Fig. 1h of this Article was inadvertently duplicated from panel i. The correct version of the...

    Xuan Cao, Tomonori Kaneko, Jenny S. Li, An-Dong Liu, Courtney Voss in Nature Communications (2015)

  10. Article

    Open Access

    A phosphorylation switch controls the spatiotemporal activation of Rho GTPases in directional cell migration

    Although cell migration plays a central role in development and disease, the underlying molecular mechanism is not fully understood. Here we report that a phosphorylation-mediated molecular switch comprising d...

    Xuan Cao, Tomonori Kaneko, Jenny S. Li, An-Dong Liu, Courtney Voss in Nature Communications (2015)

  11. No Access

    Article

    Insolubilization of Cadmium in Paddy Field Using Atomized Iron Powder and Extracting Reagent

    The insolubilization of cadmium in the soil of a naturally cadmium-contaminated paddy field was studied using an atomized iron powder and an extracting reagent. Cadmium in the soil was extracted into the water...

    Kiyoharu Nakatani, Yuichi Makino, Yuki Shimura, Tomohiro Furumura in Analytical Sciences (2013)

  12. Article

    Open Access

    Phosphotyrosine recognition domains: the typical, the atypical and the versatile

    SH2 domains are long known prominent players in the field of phosphotyrosine recognition within signaling protein networks. However, over the years they have been joined by an increasing number of other protei...

    Tomonori Kaneko, Rakesh Joshi, Stephan M Feller in Cell Communication and Signaling (2012)