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Article
Open AccessGaur genome reveals expansion of sperm odorant receptors in domesticated cattle
The gaur (Bos gaurus) is the largest extant wild bovine species, native to South and Southeast Asia, with unique traits, and is listed as vulnerable by the International Union for Conservation of Nature (IUCN).
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Article
Open AccessSalMotifDB: a tool for analyzing putative transcription factor binding sites in salmonid genomes
Recently developed genome resources in Salmonid fish provides tools for studying the genomics underlying a wide range of properties including life history trait variation in the wild, economically important tr...
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Article
Open AccessA fast method for calculating reliable event supports in tree reconciliations via Pareto optimality
Given a gene and a species tree, reconciliation methods attempt to retrieve the macro-evolutionary events that best explain the discrepancies between the two tree topologies. The DTL parsimonious approach sear...
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Article
Open AccessEfficient algorithms for reconciling gene trees and species networks via duplication and loss events
Reconciliation methods explain topology differences between a species tree and a gene tree by evolutionary events other than speciations. However, not all phylogenies are trees: hybridization can occur and cre...
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Chapter and Conference Paper
On a Conjecture about Compatibility of Multi-states Characters
Perfect phylogeny consisting of determining the compatibility of a set of characters is known to be NP-complete [4,28]. We propose in this article a conjecture on the necessary and sufficient conditions of com...
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Chapter and Conference Paper
Level-k Phylogenetic Networks Are Constructable from a Dense Triplet Set in Polynomial Time
For a given dense triplet set \(\mathcal{T}\) , there exist two natural questions [7]: Does there exist any phylogenetic network c...
