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  1. Article

    Open Access

    A naturally-occurring 22-bp coding deletion in Ugt86Dd reduces nicotine resistance in Drosophila melanogaster

    Segregating genetic variants contribute to the response to toxic, xenobiotic compounds, and identifying these causative sites can help describe the mechanisms underlying metabolism of toxic compounds. In previ...

    Stuart J. Macdonald, Chad A. Highfill in BMC Research Notes (2020)

  2. Article

    Open Access

    Structural variants exhibit widespread allelic heterogeneity and shape variation in complex traits

    It has been hypothesized that individually-rare hidden structural variants (SVs) could account for a significant fraction of variation in complex traits. Here we identified more than 20,000 euchromatic SVs fro...

    Mahul Chakraborty, J. J. Emerson, Stuart J. Macdonald in Nature Communications (2019)

  3. Article

    Open Access

    Genetic analysis of variation in lifespan using a multiparental advanced intercross Drosophila map** population

    Considerable natural variation for lifespan exists within human and animal populations. Genetically dissecting this variation can elucidate the pathways and genes involved in aging, and help uncover the geneti...

    Chad A. Highfill, G. Adam Reeves, Stuart J. Macdonald in BMC Genetics (2016)

  4. Article

    Open Access

    Functional transcriptomic analysis of the role of MAB-5/Hox in Q neuroblast migration in Caenorhabditis elegans

    Directed cell migration is a fundamental process in normal development and in tumor metastasis. In C. elegans the MAB-5/Hox transcription factor is a determinant of posterior migration of the Q neuroblast descend...

    Joel V Tamayo, Mahekta Gujar, Stuart J Macdonald, Erik A Lundquist in BMC Genomics (2013)

  5. Article

    Open Access

    Fine scale structural variants distinguish the genomes of Drosophila melanogaster and D. pseudoobscura

    A primary objective of comparative genomics is to identify genomic elements of functional significance that contribute to phenotypic diversity. Complex changes in genome structure (insertions, duplications, re...

    Stuart J Macdonald, Anthony D Long in Genome Biology (2006)

  6. Article

    Open Access

    A low-cost open-source SNP genoty** platform for association map** applications

    Association map** aimed at identifying DNA polymorphisms that contribute to variation in complex traits entails genoty** a large number of single-nucleotide polymorphisms (SNPs) in a very large panel of in...

    Stuart J Macdonald, Tomi Pastinen, Anne Genissel, Theodore W Cornforth in Genome Biology (2005)