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  1. No Access

    Chapter and Conference Paper

    A Surface-Normal Based Neural Framework for Colonoscopy Reconstruction

    Reconstructing a 3D surface from colonoscopy video is challenging due to illumination and reflectivity variation in the video frame that can cause defective shape predictions. Aiming to overcome this challenge...

    Shuxian Wang, Yubo Zhang, Sarah K. McGill in Information Processing in Medical Imaging (2023)

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    Chapter and Conference Paper

    Lighting Enhancement Aids Reconstruction of Colonoscopic Surfaces

    High screening coverage during colonoscopy is crucial to effectively prevent colon cancer. Previous work has allowed alerting the doctor to unsurveyed regions by reconstructing the 3D colonoscopic surface from...

    Yubo Zhang, Shuxian Wang, Ruibin Ma in Information Processing in Medical Imaging (2021)

  3. No Access

    Chapter and Conference Paper

    SlicerSALT: Shape AnaLysis Toolbox

    SlicerSALT is an open-source platform for disseminating state-of-the-art methods for performing statistical shape analysis. These methods are developed as 3D Slicer extensions to take advantage of its powerful...

    Jared Vicory, Laura Pascal, Pablo Hernandez, James Fishbaugh in Shape in Medical Imaging (2018)

  4. No Access

    Article

    Non-linear Hypothesis Testing of Geometric Object Properties of Shapes Applied to Hippocampi

    This paper presents a novel method to test mean differences of geometric object properties (GOPs). The method is designed for data whose representations include both Euclidean and non-Euclidean elements. It is...

    Jörn Schulz, Stephen M. Pizer, J. S. Marron in Journal of Mathematical Imaging and Vision (2016)

  5. No Access

    Chapter

    Nested Sphere Statistics of Skeletal Models

    We seek a form of object model that exactly and completely captures the interior of most non-branching anatomic objects and simultaneously is well suited for probabilistic analysis on populations of such objec...

    Stephen M. Pizer, Sungkyu Jung, Dibyendusekhar Goswami in Innovations for Shape Analysis (2013)

  6. No Access

    Chapter and Conference Paper

    A Learning-Based Patient Repositioning Method from Limited-Angle Projections

    This paper presents a novel patient repositioning method from limitedangle tomographic projections. It uses a machine learning strategy. Given a single planning CT image (3D) of a patient, one applies patient-...

    Chen-Rui Chou, C. Brandon Frederick, Sha X. Chang in Brain, Body and Machine (2010)

  7. No Access

    Chapter and Conference Paper

    Generalized PCA via the Backward Stepwise Approach in Image Analysis

    Principal component analysis (PCA) for various types of image data is analyzed in terms of the forward and backward stepwise viewpoints. In the traditional forward view, PCA and approximating subspaces are con...

    Sungkyu Jung, **aoxiao Liu, J. S. Marron, Stephen M. Pizer in Brain, Body and Machine (2010)

  8. No Access

    Book

    Medial Representations

    Mathematics, Algorithms and Applications

    Kaleem Siddiqi, Stephen M. Pizer in Computational Imaging and Vision (2008)

  9. No Access

    Article

    Statistical Multi-Object Shape Models

    The shape of a population of geometric entities is characterized by both the common geometry of the population and the variability among instances. In the deformable model approach, it is described by a probab...

    Conglin Lu, Stephen M. Pizer, Sarang Joshi in International Journal of Computer Vision (2007)

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    Chapter and Conference Paper

    Geometrically Proper Models in Statistical Training

    In deformable model segmentation, the geometric training process plays a crucial role in providing shape statistical priors and appearance statistics that are used as likelihoods. Also, the geometric training ...

    Qiong Han, Derek Merck, Josh Levy in Information Processing in Medical Imaging (2007)

  11. No Access

    Chapter and Conference Paper

    Regional Appearance in Deformable Model Segmentation

    Automated medical image segmentation is a challenging task that benefits from the use of effective image appearance models. In this paper, we compare appearance models at three regional scales for statisticall...

    Joshua V. Stough, Robert E. Broadhurst in Information Processing in Medical Imaging (2007)

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    Chapter and Conference Paper

    Population-Based Fitting of Medial Shape Models with Correspondence Optimization

    A crucial problem in statistical shape analysis is establishing the correspondence of shape features across a population. While many solutions are easy to express using boundary representations, this has been a c...

    Timothy B. Terriberry, James N. Damon in Information Processing in Medical Imaging (2007)

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    Chapter and Conference Paper

    Statistics of Pose and Shape in Multi-object Complexes Using Principal Geodesic Analysis

    A main focus of statistical shape analysis is the description of variability of a population of geometric objects. In this paper, we present work in progress towards modeling the shape and pose variability of ...

    Martin Styner, Kevin Gorczowski, Tom Fletcher in Medical Imaging and Augmented Reality (2006)

  14. No Access

    Chapter

    Shape Variation of Medial Axis Representations via Principal Geodesic Analysis on Symmetric Spaces

    Statistical shape analysis of anatomical structures plays an important role in many medical image analysis applications. For instance, shape statistics are useful in understanding the structural changes in ana...

    P. Thomas Fletcher, Stephen M. Pizer, Sarang C. Joshi in Statistics and Analysis of Shapes (2006)

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    Book

  16. No Access

    Chapter and Conference Paper

    Estimating the Statistics of Multi-object Anatomic Geometry Using Inter-object Relationships

    We present a methodology for estimating the probability of multi-object anatomic complexes that reflects both the individual objects’ variability and the variability of the inter-relationships between objects....

    Stephen M. Pizer, Ja-Yeon Jeong, Conglin Lu in Deep Structure, Singularities, and Compute… (2005)

  17. No Access

    Chapter and Conference Paper

    Deep Structure of Images in Populations Via Geometric Models in Populations

    We face the question of how to produce a scale space of image intensities relative to a scale space of objects or other characteristic image regions filling up the image space, when both images and objects are...

    Stephen M. Pizer, Ja-Yeon Jeong in Deep Structure, Singularities, and Compute… (2005)

  18. No Access

    Chapter and Conference Paper

    Histogram Statistics of Local Model-Relative Image Regions

    We present a novel approach to statistically characterize histograms of model-relative image regions. A multiscale model is used as an aperture to define image regions at multiple scales. We use this image des...

    Robert E. Broadhurst, Joshua Stough in Deep Structure, Singularities, and Compute… (2005)

  19. No Access

    Chapter and Conference Paper

    Multi-figure Anatomical Objects for Shape Statistics

    Multi-figure m-reps allow us to represent and analyze a complex anatomical object by its parts, by relations among its parts, and by the object itself as a whole entity. This representation also enables us to ...

    Qiong Han, Stephen M. Pizer, Derek Merck in Information Processing in Medical Imaging (2005)

  20. Chapter and Conference Paper

    Prostate Shape Modeling Based on Principal Geodesic Analysis Bootstrap**

    The use of statistical shape models in medical image analysis is growing due to the ability to incorporate prior organ shape knowledge for tasks such as segmentation, registration, and classification.

    Erik Dam, P. Thomas Fletcher in Medical Image Computing and Computer-Assis… (2004)

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