3 Result(s)
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Stefan Kurtz
Biomedicine
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Article
Open AccessLTRsift: a graphical user interface for semi-automatic classification and postprocessing of de novo detected LTR retrotransposons
Long terminal repeat (LTR) retrotransposons are a class of eukaryotic mobile elements characterized by a distinctive sequence similarity-based structure. Hence they are well suited for computational identifica...
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Article
Open AccessSelective regain of egfr gene copies in CD44+/CD24-/lowbreast cancer cellular model MDA-MB-468
Increased transcription of oncogenes like the epidermal growth factor receptor (EGFR) is frequently caused by amplification of the whole gene or at least of regulatory sequences. Aim of this study was to pinpo...
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Protocol
MetaGenomeThreader: A Software Tool for Predicting Genes in DNA-Sequences of Metagenome Projects
We consider a gene finding method that is specifically designed to work on metagenome sequences. The method can handle short metagenome sequences with in-frame stop codons as well as frame shifts. It delivers ...
