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Open AccessAcceleration of wheat breeding: enhancing efficiency and practical application of the speed breeding system
Crop breeding should be accelerated to address global warming and climate change. Wheat (Triticum aestivum L.) is a major food crop. Speed breeding (SB) and speed vernalization (SV) techniques for spring and wint...
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Article
Open AccessDynamic Transcriptome Changes Driven by the Mutation of OsCOP1 Underlie Flavonoid Biosynthesis and Embryogenesis in the Develo** Rice Seed
CONSTITUTIVE PHOTOMORPHOGENIC 1 (COP1), an E3 ubiquitin ligase, functions as a central repressor of light signaling and regulates various light-mediated developmental and metabolic processes in plants. However...
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Article
Open AccessOsGATA16, a GATA Transcription Factor, Confers Cold Tolerance by Repressing OsWRKY45–1 at the Seedling Stage in Rice
Cold stress is the main abiotic stress in rice, which seriously affects the growth and yield of rice. Identification of cold tolerance genes is of great significance for rice to solve these problems. GATA-fami...
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Article
Monitoring rice anther proteome expression patterns during pollen development
Rice (Oryza sativa L.) pollen grains are highly sensitive to extreme temperatures. Studies on the proteomic analysis of pollen at different developmental stages are limited. In this study, to identify proteins ex...
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Article
A new SNP in cyOsPPDK gene is associated with floury endosperm in Suweon 542
Pyruvate orthophosphate dikinase (PPDK) is a component of glycolysis to mediate endosperm energy charge by adjusting the ratio of ATP to ADP and AMP that proposed to balance the flow of carbon into starch, pro...
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Article
Quantitative shotgun proteomic analysis of cold-stressed mature rice anthers
Rice crops are vulnerable to low temperatures. During development, the reproductive stage is particularly sensitive to cold exposure, which causes abnormal pollen development and a high degree of male sterilit...
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Article
Open AccessGenome-wide resequencing of KRICE_CORE reveals their potential for future breeding, as well as functional and evolutionary studies in the post-genomic era
Rice germplasm collections continue to grow in number and size around the world. Since maintaining and screening such massive resources remains challenging, it is important to establish practical methods to ma...
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Article
Analysis of quantitative trait loci associated with seed germination and coleoptile length under low temperature condition
Low temperature stress will lower the germination rate of rice, reduce its growth, and delay the emergence of rice seedlings from paddy water surface, resulting in decreased seedling and mortality. Here, we co...
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Article
Open AccessA quantitative shotgun proteomics analysis of germinated rice embryos and coleoptiles under low-temperature conditions
At low temperatures, rice grains have a reduced germination rate and grow more slowly, which delays the emergence of rice seedlings from the paddy water surface and significantly increases seedling mortality. ...
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Marker-Assisted Breeding
Marker-assisted breeding (MAB) is based on the theories and technology of molecular biology to improve the efficiency of conventional breeding. Molecular markers can be applied to marker-assisted selection (MA...
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Article
Association analysis of seed longevity in rice under conventional and high-temperature germination conditions
Seed longevity varies considerably in cultivated rice, but the underlying mechanism of longevity is not well understood. To measure seed longevity, we performed an aging treatment at 45 °C on seeds maintained ...
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Article
Association analysis of physicochemical traits on eating quality in rice (Oryza sativa L.)
Improvement of rice eating quality is an important objective in current breeding programs. In this study, 130 rice accessions of diverse origin were genotyped using 170 SSR markers to identify marker–trait ass...
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Article
Trends in genomics and molecular marker systems for the development of some underutilized crops
The term ‘underutilized’ is often used to characterize the range of plant species whose potential contribution to food security, health, income generation, and environmental services has not yet been fully exp...
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Article
SNP marker integration and QTL analysis of 12 agronomic and morphological traits in F8 RILs of pepper (Capsicum annuum L.)
Red pepper, Capsicum annuum L., has been attracting geneticists’ and breeders’ attention as one of the important agronomic crops. This study was to integrate 41 SNP markers newly developed from comparative transc...
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Article
Development and use of novel SSR markers for molecular genetic diversity in Italian millet (Setaria italica L.)
Italian millet is a commercially important grain crop. Nineteen polymorphic simple sequence repeat (SSR) markers, developed through construction of an SSR-enriched library from genomic DNA of Italian millet (Seta...
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Article
Identification of quantitative trait loci associated with rice eating quality traits using a population of recombinant inbred lines derived from a cross between two temperate japonica cultivars
Improved eating quality is a major breeding target in japonica rice due to market demand. In this study, we performed genetic analysis to identify quantitative trait loci (QTLs) that control rice eating quality t...
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Article
Identification of QTLs for seed germination capability after various storage periods using two RIL populations in rice
Seed germination capability of rice is one of the important traits in the production and storage of seeds. Quantitative trait loci (QTL) associated with seed germination capability in various storage periods w...