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  1. Article

    Open Access

    Morphometrics in three dimensional choroidal vessel models constructed from swept-source optical coherence tomography images

    We created three types of vessel models: vessel volume, surface, and line models from swept-source optical coherence tomography images and tested experimentally calculated three-dimensional (3D) biomarkers. Th...

    Yukinori Sugano, Shunsuke Maeda, Yutaka Kato, Akihito Kasai in Scientific Reports (2022)

  2. Article

    Open Access

    TAS1553, a small molecule subunit interaction inhibitor of ribonucleotide reductase, exhibits antitumor activity by causing DNA replication stress

    Ribonucleotide reductase (RNR) is composed of two non-identical subunits, R1 and R2, and plays a crucial role in balancing the cellular dNTP pool, establishing it as an attractive cancer target. Herein, we rep...

    Hiroyuki Ueno, Takuya Hoshino, Wakako Yano, Sayaka Tsukioka in Communications Biology (2022)

  3. No Access

    Article

    Validity of the Algorithm for Liver Resection of Hepatocellular Carcinoma in the Caudate Lobe

    We aimed to validate our algorithm for resecting Hepatocellular carcinoma (HCC) in the caudate lobe based on tumor location, tumor size, and indocyanine green clearance rate.

    Nao Yoshida, Yutaka Midorikawa, Tokio Higaki, Hisashi Nakayama in World Journal of Surgery (2022)

  4. Article

    Open Access

    Artificial intelligence-based computational framework for drug-target prioritization and inference of novel repositionable drugs for Alzheimer’s disease

    Identifying novel therapeutic targets is crucial for the successful development of drugs. However, the cost to experimentally identify therapeutic targets is huge and only approximately 400 genes are targets f...

    Shingo Tsuji, Takeshi Hase, Ayako Yachie-Kinoshita in Alzheimer's Research & Therapy (2021)

  5. Article

    Open Access

    Semantic Segmentation of the Choroid in Swept Source Optical Coherence Tomography Images for Volumetrics

    The choroid is a complex vascular tissue that is covered with the retinal pigment epithelium. Ultra high speed swept source optical coherence tomography (SS-OCT) provides us with high-resolution cube scan imag...

    Shingo Tsuji, Tetsuju Sekiryu, Yukinori Sugano, Akira Ojima in Scientific Reports (2020)

  6. No Access

    Article

    Liver Resection Versus Embolization for Recurrent Hepatocellular Carcinoma

    Despite curative resection, hepatocellular carcinoma (HCC) has a high probability of recurrence. We validated the potential role of liver resection (LR) for recurrent HCC.

    Yutaka Midorikawa, Tadatoshi Takayama, Masamichi Moriguchi in World Journal of Surgery (2020)

  7. No Access

    Article

    Prediction of esophageal varices by liver and spleen MR elastography

    We aimed to assess the diagnostic performance of MR elastography (MRE) in predicting esophageal varices (EVs) in patients with chronic liver disease.

    Hayato Abe, Yutaka Midorikawa, Naoki Matsumoto, Mitsuhiko Moriyama in European Radiology (2019)

  8. Article

    Open Access

    A prediction model for the grade of liver fibrosis using magnetic resonance elastography

    Liver stiffness measurement (LSM) has recently become available for assessment of liver fibrosis. We aimed to develop a prediction model for liver fibrosis using clinical variables, including LSM.

    Yusuke Mitsuka, Yutaka Midorikawa, Hayato Abe, Naoki Matsumoto in BMC Gastroenterology (2017)

  9. No Access

    Article

    No Need of Immediate Treatment for Hypovascular Tumors Associated with Hepatocellular Carcinoma

    Hypovascular tumors associated with hepatocellular carcinoma (HCC) can be diagnosed, but it remains unknown whether such lesions should be treated immediately. This study aimed to clarify the clinical signific...

    Yutaka Midorikawa, Tadatoshi Takayama, Satoshi Nara in World Journal of Surgery (2016)

  10. Article

    Open Access

    Clinical score to predict the risk of bile leakage after liver resection

    In liver resection, bile leakage remains the most common cause of operative morbidity. In order to predict the risk of this complication on the basis of various factors, we developed a clinical score system to...

    Takahiro Kajiwara, Yutaka Midorikawa, Shintaro Yamazaki, Tokio Higaki in BMC Surgery (2016)

  11. No Access

    Article

    Surgical Outcomes in Patients with Hepatocellular Carcinoma Associated with Metabolic Syndrome

    Only a few papers have focused on the surgical outcomes of patients with hepatocellular carcinoma (HCC) associated with the metabolic syndrome. We compared the outcomes of patients with metabolic HCC with thos...

    Naoki Yoshida, Tadatoshi Takayama, Yutaka Midorikawa in World Journal of Surgery (2015)

  12. No Access

    Article

    Trans-ancestry mutational landscape of hepatocellular carcinoma genomes

    Tatsuhiro Shibata, David Wheeler, Hiroyuki Aburatani and colleagues report the genomic, exomic and oncoviral sequencing of hundreds of liver cancers from the United States and Japan. The authors analyzed mutat...

    Yasushi Totoki, Kenji Tatsuno, Kyle R Covington, Hiroki Ueda in Nature Genetics (2014)

  13. Article

    Open Access

    PRC2 overexpression and PRC2-target gene repression relating to poorer prognosis in small cell lung cancer

    Small cell lung cancer (SCLC) is a subtype of lung cancer with poor prognosis. Expression array analysis of 23 SCLC cases and 42 normal tissues revealed that EZH2 and other PRC2 members were highly expressed in S...

    Teruyuki Sato, Atsushi Kaneda, Shingo Tsuji, Takayuki Isagawa in Scientific Reports (2013)

  14. Article

    Open Access

    A simple knowledge-based mining method for exploring hidden key molecules in a human biomolecular network

    In the functional genomics analysis domain, various methodologies are available for interpreting the results produced by high-throughput biological experiments. These methods commonly use a list of genes as an...

    Shingo Tsuji, Sigeo Ihara, Hiroyuki Aburatani in BMC Systems Biology (2012)

  15. No Access

    Article

    Roles of double-balloon endoscopy in the diagnosis and treatment of Crohn’s disease: a multicenter experience

    Double-balloon endoscopy (DBE) examinations are not yet widely accepted as routine procedures for examining the small bowel of patients with Crohn’s disease (CD).

    Jumpei Kondo, Hideki Iijima, Takashi Abe, Masato Komori in Journal of Gastroenterology (2010)

  16. No Access

    Article

    Restoration of gut motility in Kit-deficient mice by bone marrow transplantation

    Interstitial cells of Cajal (ICC) play important roles in autonomic gut motility as electrical pacemakers and mediators of neural regulation of smooth muscle functions. Insufficiency of ICC has been reported i...

    Shuji Ishii, Shingo Tsuji, Masahiko Tsujii, Tsutomu Nishida in Journal of Gastroenterology (2009)

  17. No Access

    Article

    Helicobacter Pylori Infection Induces Candidate Stem Cell Marker Musashi-1 in the Human Gastric Epithelium

    Musashi-1 (Msi-1), a mammalian neural RNA-binding protein, has been found to play important roles in the maintenance of stem cell states and differentiation in neural stem cells and mouse intestinal cells. We ...

    Hiroaki Murata, Shingo Tsuji, Masahiko Tsujii in Digestive Diseases and Sciences (2008)

  18. No Access

    Article

    Cultured bone marrow cell local implantation accelerates healing of ulcers in mice

    The therapeutic potential of bone marrow (BM)-derived cells in ulcers is not known. This study aimed to clarify (1) cell types that are derived from the BM which infiltrate ulcers; (2) whether BM-derived cells...

    Tsutomu Nishida, Shingo Tsuji, Masahiko Tsujii, Shuji Ishii in Journal of Gastroenterology (2008)

  19. No Access

    Article

    Geranylgeranylacetone Induces Cyclooxygenase-2 Expression in Cultured Rat Gastric Epithelial Cells Through NF-κB

    Geranylgeranylacetone (GGA) effectively protects the gastric mucosa against noxious agents. The precise mechanisms underlying the gastroprotective actions of GGA are not known. To elucidate the precise mechani...

    Tsutomu Nishida, Yuki Yabe, Hai Ying Fu, Yujiro Hayashi in Digestive Diseases and Sciences (2007)

  20. No Access

    Article

    Gastroprotective Agent Rebamipide Induces Cyclooxygenase-2 (COX-2) in Gastric Epithelial Cells

    Cyclooxyngease-2 (COX-2) is a key enzyme in prostaglandin (PG) synthesis, and COX-2 induction plays an important role in the healing of gastric ulceration. Rebamipide is a gastroprotective agent and attenuates...

    Hiroaki Murata, Yuki Yabe, Shingo Tsuji, Masahiko Tsujii in Digestive Diseases and Sciences (2005)

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