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  1. Article

    Open Access

    Evolution and diversification of Mountain voles (Rodentia: Cricetidae)

    The systematics of the Cricetid genus Neodon have long been fraught with uncertainty due to sampling issues and a lack of comprehensive datasets. To gain better insights into the phylogeny and evolution of Neodon

    Shaoying Liu, Chengran Zhou, Guanliang Meng, Tao Wan in Communications Biology (2022)

  2. Article

    Open Access

    A super pan-genomic landscape of rice

    Pan-genomes from large natural populations can capture genetic diversity and reveal genomic complexity. Using de novo long-read assembly, we generated a graph-based super pan-genome of rice consisting of a 251...

    Lianguang Shang, **aoxia Li, Huiying He, Qiaoling Yuan, Yanni Song in Cell Research (2022)

  3. Article

    Open Access

    Beyond Drosophila: resolving the rapid radiation of schizophoran flies with phylotranscriptomics

    The most species-rich radiation of animal life in the 66 million years following the Cretaceous extinction event is that of schizophoran flies: a third of fly diversity including Drosophila fruit fly model organi...

    Keith M. Bayless, Michelle D. Trautwein, Karen Meusemann, Seunggwan Shin in BMC Biology (2021)

  4. Article

    Open Access

    Efficient COI barcoding using high throughput single-end 400 bp sequencing

    Over the last decade, the rapid development of high-throughput sequencing platforms has accelerated species description and assisted morphological classification through DNA barcoding. However, the current hig...

    Chentao Yang, Yuxuan Zheng, Shang** Tan, Guanliang Meng, Wei Rao in BMC Genomics (2020)

  5. Article

    Open Access

    Four myriapod relatives – but who are sisters? No end to debates on relationships among the four major myriapod subgroups

    Phylogenetic relationships among the myriapod subgroups Chilopoda, Diplopoda, Symphyla and Pauropoda are still not robustly resolved. The first phylogenomic study covering all subgroups resolved phylogenetic r...

    Nikolaus U. Szucsich, Daniela Bartel, Alexander Blanke in BMC Evolutionary Biology (2020)

  6. Article

    Open Access

    Correction to: An integrative phylogenomic approach to elucidate the evolutionary history and divergence times of Neuropterida (Insecta: Holometabola)

    An amendment to this paper has been published and can be accessed via the original article.

    Alexandros Vasilikopoulos, Bernhard Misof, Karen Meusemann in BMC Evolutionary Biology (2020)

  7. Article

    Open Access

    Correction to: The genome sequence of the grape phylloxera provides insights into the evolution, adaptation, and invasion routes of an iconic pest

    An amendment to this paper has been published and can be accessed via the original article.

    Claude Rispe, Fabrice Legeai, Paul D. Nabity, Rosa Fernández in BMC Biology (2020)

  8. Article

    Open Access

    Genomic architecture of endogenous ichnoviruses reveals distinct evolutionary pathways leading to virus domestication in parasitic wasps

    Polydnaviruses (PDVs) are mutualistic endogenous viruses inoculated by some lineages of parasitoid wasps into their hosts, where they facilitate successful wasp development. PDVs include the ichnoviruses and b...

    Fabrice Legeai, Bernardo F. Santos, Stéphanie Robin, Anthony Bretaudeau in BMC Biology (2020)

  9. Article

    Open Access

    The genome sequence of the grape phylloxera provides insights into the evolution, adaptation, and invasion routes of an iconic pest

    Although native to North America, the invasion of the aphid-like grape phylloxera Daktulosphaira vitifoliae across the globe altered the course of grape cultivation. For the past 150 years, viticulture relied on ...

    Claude Rispe, Fabrice Legeai, Paul D. Nabity, Rosa Fernández in BMC Biology (2020)

  10. Article

    Open Access

    An integrative phylogenomic approach to elucidate the evolutionary history and divergence times of Neuropterida (Insecta: Holometabola)

    The latest advancements in DNA sequencing technologies have facilitated the resolution of the phylogeny of insects, yet parts of the tree of Holometabola remain unresolved. The phylogeny of Neuropterida has be...

    Alexandros Vasilikopoulos, Bernhard Misof, Karen Meusemann in BMC Evolutionary Biology (2020)

  11. Article

    Open Access

    Identification of transcription factor genes involved in anthocyanin biosynthesis in carrot (Daucus carota L.) using RNA-Seq

    Anthocyanins are water-soluble colored flavonoids present in multiple organs of various plant species including flowers, fruits, leaves, stems and roots. DNA-binding R2R3-MYB transcription factors, basic helix–lo...

    Miyako Kodama, Henrik Brinch-Pedersen, Shrikant Sharma, Inger Bæksted Holme in BMC Genomics (2018)

  12. Article

    Open Access

    The molecular evolutionary dynamics of oxidative phosphorylation (OXPHOS) genes in Hymenoptera

    The primary energy-producing pathway in eukaryotic cells, the oxidative phosphorylation (OXPHOS) system, comprises proteins encoded by both mitochondrial and nuclear genes. To maintain the function of the OXPH...

    Yiyuan Li, Rui Zhang, Shanlin Liu, Alexander Donath in BMC Evolutionary Biology (2017)

  13. Article

    Open Access

    Transcriptomic data from panarthropods shed new light on the evolution of insulator binding proteins in insects

    Body plan development in multi-cellular organisms is largely determined by homeotic genes. Expression of homeotic genes, in turn, is partially regulated by insulator binding proteins (IBPs). While only a few e...

    Thomas Pauli, Lucia Vedder, Daniel Dowling, Malte Petersen, Karen Meusemann in BMC Genomics (2016)

  14. Article

    Open Access

    Evolution of neuropeptides in non-pterygote hexapods

    Neuropeptides are key players in information transfer and act as important regulators of development, growth, metabolism, and reproduction within multi-cellular animal organisms (Metazoa). These short protein-...

    Christian Derst, Heinrich Dircksen, Karen Meusemann, **n Zhou in BMC Evolutionary Biology (2016)