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  1. Article

    Open Access

    Antioxidant enzymes that target hydrogen peroxide are conserved across the animal kingdom, from sponges to mammals

    Oxygen is the sustenance of aerobic life and yet is highly toxic. In early life, antioxidants functioned solely to defend against toxic effects of reactive oxygen species (ROS). Later, as aerobic metabolisms e...

    Olivia H. Hewitt, Sandie M. Degnan in Scientific Reports (2023)

  2. Article

    Open Access

    Sex-specific expression of pheromones and other signals in gravid starfish

    Many echinoderms form seasonal aggregations prior to spawning. In some fecund species, a spawning event can lead to population outbreaks with detrimental ecosystem impacts. For instance, outbreaks of crown-of-...

    Mathias Jönsson, Marie Morin, Conan K. Wang, David J. Craik in BMC Biology (2022)

  3. Article

    Open Access

    Distribution and diversity of ROS-generating enzymes across the animal kingdom, with a focus on sponges (Porifera)

    Reactive derivatives of oxygen (reactive oxygen species; ROS) are essential in signalling networks of all aerobic life. Redox signalling, based on cascades of oxidation–reduction reactions, is an evolutionaril...

    Olivia H. Hewitt, Sandie M. Degnan in BMC Biology (2022)

  4. Article

    Open Access

    Ribosomal RNA-Depletion Provides an Efficient Method for Successful Dual RNA-Seq Expression Profiling of a Marine Sponge Holobiont

    Investigations of host-symbiont interactions can benefit enormously from a complete and reliable holobiont gene expression profiling. The most efficient way to acquire holobiont transcriptomes is to perform RN...

    Xueyan **ang, Davide Poli, Bernard M. Degnan, Sandie M. Degnan in Marine Biotechnology (2022)

  5. No Access

    Protocol

    Staining and Tracking Methods for Studying Sponge Cell Dynamics

    To better understand the origin of animal cell types, body plans, and other morphological features, further biological knowledge and understanding are needed from non-bilaterian phyla, namely, Placozoa, Ctenop...

    Carole Borchiellini, Sandie M. Degnan in Developmental Biology of the Sea Urchin an… (2021)

  6. Article

    Author Correction: The mid-developmental transition and the evolution of animal body plans

    An Amendment to this paper has been published and can be accessed via a link at the top of the paper.

    Michal Levin, Leon Anavy, Alison G. Cole, Eitan Winter, Natalia Mostov in Nature (2019)

  7. Article

    Open Access

    Co-expression of synaptic genes in the sponge Amphimedon queenslandica uncovers ancient neural submodules

    The synapse is a complex cellular module crucial to the functioning of neurons. It evolved largely through the exaptation of pre-existing smaller submodules, each of which are comprised of ancient sets of prot...

    Eunice Wong, Jan Mölter, Victor Anggono, Sandie M. Degnan in Scientific Reports (2019)

  8. No Access

    Article

    Convergent evolution of a vertebrate-like methylome in a marine sponge

    Vertebrates have highly methylated genomes at CpG positions, whereas invertebrates have sparsely methylated genomes. This increase in methylation content is considered a major regulatory innovation of vertebra...

    Alex de Mendoza, William L. Hatleberg, Kevin Pang in Nature Ecology & Evolution (2019)

  9. No Access

    Article

    Pluripotency and the origin of animal multicellularity

    A widely held—but rarely tested—hypothesis for the origin of animals is that they evolved from a unicellular ancestor, with an apical cilium surrounded by a microvillar collar, that structurally resembled mode...

    Shunsuke Sogabe, William L. Hatleberg, Kevin M. Kocot, Tahsha E. Say in Nature (2019)

  10. Article

    Open Access

    The first identification of complete Eph-ephrin signalling in ctenophores and sponges reveals a role for neofunctionalization in the emergence of signalling domains

    Animals have a greater diversity of signalling pathways than their unicellular relatives, consistent with the evolution and expansion of these pathways occurring in parallel with the origin of animal multicell...

    Arunkumar Krishnan, Bernard M. Degnan, Sandie M. Degnan in BMC Evolutionary Biology (2019)

  11. No Access

    Article

    Seasonal changes in environmental nutrient availability and biomass composition in a coral reef sponge

    Sponges are crucial ecosystem engineers in most marine habitats, playing a critical role in cycling elements between the water column and the sea floor. Despite this, it is unclear how the nutritional status o...

    Jabin R. Watson, Jens O. Krömer, Bernard M. Degnan, Sandie M. Degnan in Marine Biology (2017)

  12. Article

    Open Access

    The crown-of-thorns starfish genome as a guide for biocontrol of this coral reef pest

    Genome sequencing and proteomic analyses of the crown-of-thorns starfish identify species-specific secreted factors that are associated with aggregating starfish and might be useful for biocontrol strategies.

    Michael R. Hall, Kevin M. Kocot, Kenneth W. Baughman in Nature (2017)

  13. Article

    Open Access

    An ancient role for nitric oxide in regulating the animal pelagobenthic life cycle: evidence from a marine sponge

    In many marine invertebrates, larval metamorphosis is induced by environmental cues that activate sensory receptors and signalling pathways. Nitric oxide (NO) is a gaseous signalling molecule that regulates me...

    Nobuo Ueda, Gemma S. Richards, Bernard M. Degnan, Alexandrea Kranz in Scientific Reports (2016)

  14. No Access

    Article

    The mid-developmental transition and the evolution of animal body plans

    Embryos in a particular phylum of the animal kingdom tend to most resemble one another at a stage in the middle of embryogenesis known as the phylotypic period; a transcriptional analysis of embryogenesis from...

    Michal Levin, Leon Anavy, Alison G. Cole, Eitan Winter, Natalia Mostov in Nature (2016)

  15. No Access

    Chapter

    Porifera

    Poriferans (sponges) are sessile aquatic (largely marine) animals that are found in almost all benthic habitats. There are an estimated 15,000 species living today, although many have not been described (revie...

    Bernard M. Degnan, Maja Adamska in Evolutionary Developmental Biology of Inve… (2015)

  16. No Access

    Article

    Genomic insights into the marine sponge microbiome

  17. Many marine sponges (phylum Porifera), the most ancient of the metazoan animals, contain dense and diverse microbial communities.

  18. ...

    Ute Hentschel, Jörn Piel, Sandie M. Degnan in Nature Reviews Microbiology (2012)

  19. Article

    Open Access

    Transcriptome profiling of the demosponge Amphimedon queenslandica reveals genome-wide events that accompany major life cycle transitions

    The biphasic life cycle with pelagic larva and benthic adult stages is widely observed in the animal kingdom, including the Porifera (sponges), which are the earliest branching metazoans. The demosponge, Amphimed...

    Cecilia Conaco, Pierre Neveu, Hongjun Zhou, Mary Luz Arcila in BMC Genomics (2012)

  20. Article

    Open Access

    Marked changes in neuropeptide expression accompany broadcast spawnings in the gastropod Haliotis asinina

    A huge diversity of marine species reproduce by synchronously spawning their gametes into the water column. Although this species-specific event typically occurs in a particular season, the precise time and da...

    Patrick S York, Scott F Cummins, Sandie M Degnan, Ben J Woodcroft in Frontiers in Zoology (2012)

  21. Article

    Open Access

    Variation in rates of early development in Haliotis asinina generate competent larvae of different ages

    Inter-specific comparisons of metazoan developmental mechanisms have provided a wealth of data concerning the evolution of body form and the generation of morphological novelty. Conversely, studies of intra-sp...

    Daniel J Jackson, Sandie M Degnan, Bernard M Degnan in Frontiers in Zoology (2012)

  22. Article

    Open Access

    A unique horizontal gene transfer event has provided the octocoral mitochondrial genome with an active mismatch repair gene that has potential for an unusual self-contained function

    The mitochondrial genome of the Octocorallia has several characteristics atypical for metazoans, including a novel gene suggested to function in DNA repair. This mtMutS gene is favored for octocoral molecular sys...

    Jaret P Bilewitch, Sandie M Degnan in BMC Evolutionary Biology (2011)

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