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Open AccessAuthor Correction: Drought re-routes soil microbial carbon metabolism towards emission of volatile metabolites in an artificial tropical rainforest
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Article
Open AccessMap** microhabitats of lignocellulose decomposition by a microbial consortium
The leaf-cutter ant fungal garden ecosystem is a naturally evolved model system for efficient plant biomass degradation. Degradation processes mediated by the symbiotic fungus Leucoagaricus gongylophorus are diff...
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Article
Open AccessDrought re-routes soil microbial carbon metabolism towards emission of volatile metabolites in an artificial tropical rainforest
Drought impacts on microbial activity can alter soil carbon fate and lead to the loss of stored carbon to the atmosphere as CO2 and volatile organic compounds (VOCs). Here we examined drought impacts on carbon al...
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Article
Open AccessA streamlined tandem tip-based workflow for sensitive nanoscale phosphoproteomics
Effective phosphoproteome of nanoscale sample analysis remains a daunting task, primarily due to significant sample loss associated with non-specific surface adsorption during enrichment of low stoichiometric ...
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Article
Open AccessWildfire-dependent changes in soil microbiome diversity and function
Forest soil microbiomes have crucial roles in carbon storage, biogeochemical cycling and rhizosphere processes. Wildfire season length, and the frequency and size of severe fires have increased owing to climat...
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Article
Open AccessRoot exudate composition reflects drought severity gradient in blue grama (Bouteloua gracilis)
Plant survival during environmental stress greatly affects ecosystem carbon (C) cycling, and plant–microbe interactions are central to plant stress survival. The release of C-rich root exudates is a key mechan...
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Open AccessInteractions between microbial diversity and substrate chemistry determine the fate of carbon in soil
Microbial decomposition drives the transformation of plant-derived substrates into microbial products that form stable soil organic matter (SOM). Recent theories have posited that decomposition depends on an i...
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Article
Open AccessUsing metacommunity ecology to understand environmental metabolomes
Environmental metabolomes are fundamentally coupled to microbially-linked biogeochemical processes within ecosystems. However, significant gaps exist in our understanding of their spatiotemporal organization, ...
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Article
Open AccessPublisher Correction: Influences of organic carbon speciation on hyporheic corridor biogeochemistry and microbial ecology
The original version of this Article contained an error in Fig. 6e, in which the text in the legend was omitted. This has been corrected in both the PDF and HTML versions of the article.
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Open AccessInfluences of organic carbon speciation on hyporheic corridor biogeochemistry and microbial ecology
The hyporheic corridor (HC) encompasses the river–groundwater continuum, where the mixing of groundwater (GW) with river water (RW) in the HC can stimulate biogeochemical activity. Here we propose a novel ther...
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Open AccessDiurnal cycling of rhizosphere bacterial communities is associated with shifts in carbon metabolism
The circadian clock regulates plant metabolic functions and is an important component in plant health and productivity. Rhizosphere bacteria play critical roles in plant growth, health, and development and are...
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Article
Open AccessGroundwater–surface water mixing shifts ecological assembly processes and stimulates organic carbon turnover
Environmental transitions often result in resource mixtures that overcome limitations to microbial metabolism, resulting in biogeochemical hotspots and moments. Riverine systems, where groundwater mixes with s...
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Article
Utilizing a Robotic Sprayer for High Lateral and Mass Resolution MALDI FT-ICR MSI of Microbial Cultures
The ability to visualize biochemical interactions between microbial communities using MALDI MSI has provided tremendous insights into a variety of biological fields. Matrix application using a sieve proved to ...
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Article
Open AccessMulti-omics analysis reveals regulators of the response to nitrogen limitation in Yarrowia lipolytica
Yarrowia lipolytica is an oleaginous ascomycete yeast that stores lipids in response to limitation of nitrogen. While the enzymatic pathways responsible for neutral lipid accumulation ...
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Article
Microscale depletion of high abundance proteins in human biofluids using IgY14 immunoaffinity resin: analysis of human plasma and cerebrospinal fluid
Removal of highly abundant proteins in plasma is often carried out using immunoaffinity depletion to extend the dynamic range of measurements to lower abundance species. While commercial depletion columns are ...
