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  1. Article

    Open Access

    Author Correction: Gemcitabine and cisplatin plus nivolumab as organ-sparing treatment for muscle-invasive bladder cancer: a phase 2 trial

    Matthew D. Galsky, Siamak Daneshmand, Sudeh Izadmehr in Nature Medicine (2024)

  2. Article

    Open Access

    Gemcitabine and cisplatin plus nivolumab as organ-sparing treatment for muscle-invasive bladder cancer: a phase 2 trial

    Cystectomy is a standard treatment for muscle-invasive bladder cancer (MIBC), but it is life-altering. We initiated a phase 2 study in which patients with MIBC received four cycles of gemcitabine, cisplatin, p...

    Matthew D. Galsky, Siamak Daneshmand, Sudeh Izadmehr in Nature Medicine (2023)

  3. No Access

    Article

    Functional landscapes of POLE and POLD1 mutations in checkpoint blockade-dependent antitumor immunity

    Defects in pathways governing genomic fidelity have been linked to improved response to immune checkpoint blockade therapy (ICB). Pathogenic POLE/POLD1 mutations can cause hypermutation, yet how diverse mutations...

    **aoxiao Ma, Nadeem Riaz, Robert M. Samstein, Mark Lee, Vladimir Makarov in Nature Genetics (2022)

  4. No Access

    Article

    Improved prediction of immune checkpoint blockade efficacy across multiple cancer types

    Only a fraction of patients with cancer respond to immune checkpoint blockade (ICB) treatment, but current decision-making procedures have limited accuracy. In this study, we developed a machine learning model...

    Diego Chowell, Seong-Keun Yoo, Cristina Valero, Alessandro Pastore in Nature Biotechnology (2022)

  5. No Access

    Article

    The association between tumor mutational burden and prognosis is dependent on treatment context

    In multiple cancer types, high tumor mutational burden (TMB) is associated with longer survival after treatment with immune checkpoint inhibitors (ICIs). The association of TMB with survival outside of the imm...

    Cristina Valero, Mark Lee, Douglas Hoen, **gming Wang, Zaineb Nadeem in Nature Genetics (2021)

  6. No Access

    Article

    Mutations in BRCA1 and BRCA2 differentially affect the tumor microenvironment and response to checkpoint blockade immunotherapy

    Immune checkpoint blockade (ICB) has improved outcomes for patients with advanced cancer, but the determinants of response remain poorly understood. Here we report differential effects of mutations in the homo...

    Robert M. Samstein, Chirag Krishna, **aoxiao Ma, **n Pei, Ken-Wing Lee in Nature Cancer (2020)

  7. No Access

    Article

    Immunogenic neoantigens derived from gene fusions stimulate T cell responses

    Anti-tumor immunity is driven by self versus non-self discrimination. Many immunotherapeutic approaches to cancer have taken advantage of tumor neoantigens derived from somatic mutations. Here, we demonstrate ...

    Wei Yang, Ken-Wing Lee, Raghvendra M. Srivastava, Fengshen Kuo in Nature Medicine (2019)

  8. No Access

    Article

    Tumor mutational load predicts survival after immunotherapy across multiple cancer types

    Immune checkpoint inhibitor (ICI) treatments benefit some patients with metastatic cancers, but predictive biomarkers are needed. Findings in selected cancer types suggest that tumor mutational burden (TMB) ma...

    Robert M. Samstein, Chung-Han Lee, Alexander N. Shoushtari in Nature Genetics (2019)

  9. Article

    Open Access

    Dissecting microsatellite instability in colorectal cancer: one size does not fit all

    Microsatellite instability (MSI) marks distinct subsets of tumors in many cancer types and is caused by mutations in genes required for mismatch repair. A recent report analyses the molecular foundations of MS...

    Robert M. Samstein, Timothy A. Chan in Genome Medicine (2017)

  10. No Access

    Chapter

    Combining Radiotherapy and Immunotherapy: Emerging Preclinical Observations of Lymphocyte Costimulatory and Inhibitory Receptor Modulation

    A greater understanding of immune system biology has translated into more effective cancer immunotherapeutics. This has prompted exploration of the combination of these agents with other cancer treatments such...

    Robert M. Samstein, Sadna Budhu in Increasing the Therapeutic Ratio of Radiot… (2017)

  11. No Access

    Article

    Inflammation-induced repression of chromatin bound by the transcription factor Foxp3 in regulatory T cells

    The transcription factor Foxp3 is essential for the function of regulatory T cells (Treg cells). Rudensky and colleagues show binding of Foxp3 poises target genes for repression and, after activation of Treg cell...

    Aaron Arvey, Joris van der Veeken, Robert M Samstein, Yongqiang Feng in Nature Immunology (2014)

  12. No Access

    Article

    Transcription factor Foxp3 and its protein partners form a complex regulatory network

    The transcription factor Foxp3 is essential for the function of regulatory T cells. Rudensky and colleagues show Foxp3 participates in large protein complexes that regulate gene expression of many of these com...

    Dipayan Rudra, Paul deRoos, Ashutosh Chaudhry, Rachel E Niec in Nature Immunology (2012)

  13. No Access

    Article

    Osteoclasts degrade endosteal components and promote mobilization of hematopoietic progenitor cells

    Here we investigated the potential role of bone-resorbing osteoclasts in homeostasis and stress-induced mobilization of hematopoietic progenitors. Different stress situations induced activity of osteoclasts (O...

    Orit Kollet, Ayelet Dar, Shoham Shivtiel, Alexander Kalinkovich in Nature Medicine (2006)