Skip to main content

and
  1. Article

    Open Access

    A deep semantic matching approach for identifying relevant messages for social media analysis

    There is a growing interest in using social media content for Natural Language Processing applications. However, it is not easy to computationally identify the most relevant set of tweets related to any specif...

    Frederick Brown Biggers, Somya D. Mohanty, Prashanti Manda in Scientific Reports (2023)

  2. Article

    Open Access

    A Gated Recurrent Unit based architecture for recognizing ontology concepts from biological literature

    Annotating scientific literature with ontology concepts is a critical task in biology and several other domains for knowledge discovery. Ontology based annotations can power large-scale comparative analyses in...

    Pratik Devkota, Somya D. Mohanty, Prashanti Manda in BioData Mining (2022)

  3. Article

    Open Access

    Proceedings of the 2018 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) conference

    Jonathan D. Wren, Robert J. Doerkson, Inimary T. Toby, Bindu Nanduri in BMC Bioinformatics (2019)

  4. Article

    Open Access

    Proceedings of the 2017 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference

    Jonathan D. Wren, Mikhail G. Dozmorov, Inimary Toby, Bindu Nanduri in BMC Bioinformatics (2017)

  5. Chapter and Conference Paper

    What’s Hot and What’s Not? - Exploring Trends in Bioinformatics Literature Using Topic Modeling and Keyword Analysis

    Scientists exploring a new area of research are interested to know the “hot” topics in that area in order to make informed choices. With exponential growth in scientific literature, identifying such trends man...

    Alexander Hahn, Somya D. Mohanty in Bioinformatics Research and Applications (2017)

  6. Article

    Open Access

    GOModeler- A tool for hypothesis-testing of functional genomics datasets

    Functional genomics technologies that measure genome expression at a global scale are accelerating biological knowledge discovery. Generating these high throughput datasets is relatively easy compared to the d...

    Prashanti Manda, McKinley G Freeman, Susan M Bridges, TJ Jankun-Kelly in BMC Bioinformatics (2010)

  7. Article

    Open Access

    Comparing gene annotation enrichment tools for functional modeling of agricultural microarray data

    The widespread availability of microarray technology has driven functional genomics to the forefront as scientists seek to draw meaningful biological conclusions from their microarray results. Gene annotation ...

    Bart HJ van den Berg, Chamali Thanthiriwatte, Prashanti Manda in BMC Bioinformatics (2009)