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  1. Article

    Open Access

    Prediction of 30-day, 90-day, and 1-year mortality after colorectal cancer surgery using a data-driven approach

    To develop prediction models for short-term mortality risk assessment following colorectal cancer surgery.

    Karoline Bendix Bräuner, Andi Tsouchnika in International Journal of Colorectal Disease (2024)

  2. Article

    Open Access

    Attention-based neural networks for clinical prediction modelling on electronic health records

    Deep learning models have had a lot of success in various fields. However, on structured data they have struggled. Here we apply four state-of-the-art supervised deep learning models using the attention mechan...

    Egill A. Fridgeirsson, David Sontag, Peter Rijnbeek in BMC Medical Research Methodology (2023)

  3. Article

    Open Access

    Supporting Pharmacovigilance Signal Validation and Prioritization with Analyses of Routinely Collected Health Data: Lessons Learned from an EHDEN Network Study

    Individual case reports are the main asset in pharmacovigilance signal management. Signal validation is the first stage after signal detection and aims to determine if there is sufficient evidence to justify f...

    Oskar Gauffin, Judith S. Brand, Sara Hedfors Vidlin, Daniele Sartori in Drug Safety (2023)

  4. Article

    Open Access

    Drug Utilisation Patterns of Alternatives to Ranitidine-Containing Medicines in Patients Treated with Ranitidine: A Network Analysis of Data from Six European National Databases

    Ranitidine, a histamine H2-receptor antagonist (H2RA), is indicated in the management of gastric acid-related disorders. In 2020, the European Medicines Agency (EMA) recommended suspension of all ranitidine-conta...

    Johnmary T. Arinze, Maria A. J. de Ridder, Dina Vo**ovic in Drug Safety (2023)

  5. Article

    Impact of European Union Label Changes for Fluoroquinolone-Containing Medicinal Products for Systemic and Inhalation Use: Post-Referral Prescribing Trends

    Concerns of the persistence and severity of the adverse effects of fluoroquinolones, mainly involving the nervous system, muscles and joints, resulted in the 2018 referral procedure led by the European Medicin...

    Nelly F. Ly, Clare Flach, Thom S. Lysen, Emanuil Markov in Drug Safety (2023)

  6. Article

    Open Access

    Thrombosis and thrombocytopenia after vaccination against and infection with SARS-CoV-2 in Catalonia, Spain

    Population-based studies can provide important evidence on the safety of COVID-19 vaccines. Here we compare rates of thrombosis and thrombocytopenia following vaccination against SARS-CoV-2 with the background...

    Edward Burn, Elena Roel, Andrea Pistillo in Nature Communications (2022)

  7. Article

    Open Access

    Common Problems, Common Data Model Solutions: Evidence Generation for Health Technology Assessment

    There is growing interest in using observational data to assess the safety, effectiveness, and cost effectiveness of medical technologies, but operational, technical, and methodological challenges limit its mo...

    Seamus Kent, Edward Burn, Dalia Dawoud, Pall Jonsson, Jens Torup Østby in PharmacoEconomics (2021)

  8. No Access

    Article

    Treatment pathway analysis of newly diagnosed dementia patients in four electronic health record databases in Europe

    Real-world studies to describe the use of first, second and third line therapies for the management and symptomatic treatment of dementia are lacking. This retrospective cohort study describes the first-, seco...

    Glen James, Estelle Collin, Marcus Lawrance in Social Psychiatry and Psychiatric Epidemio… (2021)

  9. Article

    Open Access

    An empirical analysis of dealing with patients who are lost to follow-up when develo** prognostic models using a cohort design

    Researchers develo** prediction models are faced with numerous design choices that may impact model performance. One key decision is how to include patients who are lost to follow-up. In this paper we perfor...

    Jenna M. Reps, Peter Rijnbeek in BMC Medical Informatics and Decision Making (2021)

  10. Article

    Open Access

    Deep phenoty** of 34,128 adult patients hospitalised with COVID-19 in an international network study

    Comorbid conditions appear to be common among individuals hospitalised with coronavirus disease 2019 (COVID-19) but estimates of prevalence vary and little is known about the prior medication use of patients. ...

    Edward Burn, Seng Chan You, Anthony G. Sena, Kristin Kostka in Nature Communications (2020)

  11. Article

    Open Access

    Feasibility and evaluation of a large-scale external validation approach for patient-level prediction in an international data network: validation of models predicting stroke in female patients newly diagnosed with atrial fibrillation

    To demonstrate how the Observational Healthcare Data Science and Informatics (OHDSI) collaborative network and standardization can be utilized to scale-up external validation of patient-level prediction models...

    Jenna M. Reps, Ross D. Williams, Seng Chan You in BMC Medical Research Methodology (2020)

  12. Article

    Open Access

    Methotrexate and relative risk of dementia amongst patients with rheumatoid arthritis: a multi-national multi-database case-control study

    Inflammatory processes have been shown to play a role in dementia. To understand this role, we selected two anti-inflammatory drugs (methotrexate and sulfasalazine) to study their association with dementia risk.

    Danielle Newby, Daniel Prieto-Alhambra in Alzheimer's Research & Therapy (2020)

  13. Article

    Open Access

    TASKA: A modular task management system to support health research studies

    Many healthcare databases have been routinely collected over the past decades, to support clinical practice and administrative services. However, their secondary use for research is often hindered by restricte...

    João Rafael Almeida, Rosa Gini in BMC Medical Informatics and Decision Making (2019)

  14. Article

    Open Access

    Risks and clinical predictors of cirrhosis and hepatocellular carcinoma diagnoses in adults with diagnosed NAFLD: real-world study of 18 million patients in four European cohorts

    Non-alcoholic fatty liver disease (NAFLD) is a common condition that progresses in some patients to steatohepatitis (NASH), cirrhosis and hepatocellular carcinoma (HCC). Here we used healthcare records of 18 m...

    Myriam Alexander, A. Katrina Loomis, Johan van der Lei in BMC Medicine (2019)

  15. Article

    Open Access

    Real-world data reveal a diagnostic gap in non-alcoholic fatty liver disease

    Non-alcoholic fatty liver disease (NAFLD) is the most common cause of liver disease worldwide. It affects an estimated 20% of the general population, based on cohort studies of varying size and heterogeneous s...

    Myriam Alexander, A. Katrina Loomis, Jolyon Fairburn-Beech in BMC Medicine (2018)

  16. Article

    Open Access

    Prediction of RNA-protein sequence and structure binding preferences using deep convolutional and recurrent neural networks

    RNA regulation is significantly dependent on its binding protein partner, known as the RNA-binding proteins (RBPs). Unfortunately, the binding preferences for most RBPs are still not well characterized. Interd...

    **aoyong Pan, Peter Rijnbeek, Junchi Yan, Hong-Bin Shen in BMC Genomics (2018)

  17. Article

    Erratum to: Antibiotic use varies substantially among adults: a cross-national study from five European Countries in the ARITMO project

    Anil Mor, Trine Frøslev, Reimar Wernich Thomsen, Alessandro Oteri in Infection (2016)

  18. No Access

    Article

    Antibiotic use varies substantially among adults: a cross-national study from five European Countries in the ARITMO project

    To examine patterns of outpatient and community antibiotic use among adults in five European countries.

    Anil Mor, Trine Frøslev, Reimar Wernich Thomsen, Alessandro Oteri in Infection (2015)

  19. No Access

    Article

    Effectiveness of risk minimization measures for cabergoline-induced cardiac valve fibrosis in clinical practice in Italy

    On June 2008, the European Medicines Agency (EMA) introduced changes to the Summary of Product Characteristics (SPC) for cabergoline and pergolide, to reduce the risk of cardiac valvulopathy in users of these ...

    Domenico Italiano, Elisa Bianchini, Maura Ilardi in Journal of Neural Transmission (2015)

  20. No Access

    Chapter and Conference Paper

    Alignment of 4D Coronary CTA with Monoplane X-ray Angiography

    We propose a 3D+t/2D+t registration strategy to relate preoperative CTA to intraoperative X-ray angiography for improved image guidance during coronary interventions. We first derive 4D coronary models from CT...

    Coert Metz, Michiel Schaap, Stefan Klein in Augmented Environments for Computer-Assist… (2012)