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  1. Article

    Open Access

    Mitoribosome structure with cofactors and modifications reveals mechanism of ligand binding and interactions with L1 stalk

    The mitoribosome translates mitochondrial mRNAs and regulates energy conversion that is a signature of aerobic life forms. We present a 2.2 Å resolution structure of human mitoribosome together with validated ...

    Vivek Singh, Yuzuru Itoh, Samuel Del’Olio, Asem Hassan in Nature Communications (2024)

  2. Article

    Open Access

    A steric gate controls P/E hybrid-state formation of tRNA on the ribosome

    The ribosome is a biomolecular machine that undergoes multiple large-scale structural rearrangements during protein elongation. Here, we focus on a conformational rearrangement during translocation, known as P...

    Mariana Levi, Kelsey Walak, Ailun Wang, Udayan Mohanty in Nature Communications (2020)

  3. Article

    Open Access

    How EF-Tu can contribute to efficient proofreading of aa-tRNA by the ribosome

    It has long been recognized that the thermodynamics of mRNA–tRNA base pairing is insufficient to explain the high fidelity and efficiency of aminoacyl-tRNA (aa-tRNA) selection by the ribosome. To rationalize t...

    Jeffrey K. Noel, Paul C. Whitford in Nature Communications (2016)

  4. Article

    Open Access

    Steric interactions lead to collective tilting motion in the ribosome during mRNA–tRNA translocation

    Translocation of mRNA and tRNA through the ribosome is associated with large-scale rearrangements of the head domain in the 30S ribosomal subunit. To elucidate the relationship between 30S head dynamics and mR...

    Kien Nguyen, Paul C. Whitford in Nature Communications (2016)

  5. No Access

    Article

    Head swivel on the ribosome facilitates translocation by means of intra-subunit tRNA hybrid sites

    During translation, transfer RNAs enter the ribosome and then move sequentially through three sites, known as A, P and E, as they transfer their attached amino acids onto the growing peptide chain. How the rib...

    Andreas H. Ratje, Justus Loerke, Aleksandra Mikolajka, Matthias Brünner in Nature (2010)