Skip to main content

and
  1. Article

    Open Access

    Xanthine oxidoreductase gene polymorphisms are associated with high risk of sepsis and organ failure

    Sepsis and associated organ failures confer substantial morbidity and mortality. Xanthine oxidoreductase (XOR) is implicated in the development of tissue oxidative damage in a wide variety of respiratory and c...

    Li Gao, Nicholas Rafaels, Tanda M. Dudenkov, Mahendra Damarla in Respiratory Research (2023)

  2. Article

    Open Access

    Multi-ancestry transcriptome-wide association analyses yield insights into tobacco use biology and drug repurposing

    Most transcriptome-wide association studies (TWASs) so far focus on European ancestry and lack diversity. To overcome this limitation, we aggregated genome-wide association study (GWAS) summary statistics, who...

    Fang Chen, **ngyan Wang, Seon-Kyeong Jang, Bryan C. Quach in Nature Genetics (2023)

  3. Article

    Open Access

    Genetic diversity fuels gene discovery for tobacco and alcohol use

    Tobacco and alcohol use are heritable behaviours associated with 15% and 5.3% of worldwide deaths, respectively, due largely to broad increased risk for disease and injury14. These substances are used across the...

    Gretchen R. B. Saunders, **ngyan Wang, Fang Chen, Seon-Kyeong Jang, Mengzhen Liu in Nature (2022)

  4. No Access

    Article

    Rare genetic variants explain missing heritability in smoking

    Common genetic variants explain less variation in complex phenotypes than inferred from family-based studies, and there is a debate on the source of this ‘missing heritability’. We investigated the contributio...

    Seon-Kyeong Jang, Luke Evans, Allison Fialkowski, Donna K. Arnett in Nature Human Behaviour (2022)

  5. Article

    Author Correction: Inherited causes of clonal haematopoiesis in 97,691 whole genomes

    A Correction to this paper has been published: https://doi.org/10.1038/s41586-021-03280-1.

    Alexander G. Bick, Joshua S. Weinstock, Satish K. Nandakumar, Charles P. Fulco in Nature (2021)

  6. Article

    Open Access

    Loss-of-function genomic variants highlight potential therapeutic targets for cardiovascular disease

    Pharmaceutical drugs targeting dyslipidemia and cardiovascular disease (CVD) may increase the risk of fatty liver disease and other metabolic disorders. To identify potential novel CVD drug targets without the...

    Jonas B. Nielsen, Oren Rom, Ida Surakka, Sarah E. Graham, Wei Zhou in Nature Communications (2020)

  7. No Access

    Article

    Inherited causes of clonal haematopoiesis in 97,691 whole genomes

    Age is the dominant risk factor for most chronic human diseases, but the mechanisms through which ageing confers this risk are largely unknown1. The age-related acquisition of somatic mutations that lead to clona...

    Alexander G. Bick, Joshua S. Weinstock, Satish K. Nandakumar, Charles P. Fulco in Nature (2020)

  8. Article

    Open Access

    Author Correction: Association study in African-admixed populations across the Americas recapitulates asthma risk loci in non-African populations

    An amendment to this paper has been published and can be accessed via a link at the top of the paper.

    Michelle Daya, Nicholas Rafaels, Tonya M. Brunetti, Sameer Chavan in Nature Communications (2019)

  9. Article

    Open Access

    Replicated methylation changes associated with eczema herpeticum and allergic response

    Although epigenetic mechanisms are important risk factors for allergic disease, few studies have evaluated DNA methylation differences associated with atopic dermatitis (AD), and none has focused on AD with ec...

    Meher Preethi Boorgula, Margaret A. Taub, Nicholas Rafaels in Clinical Epigenetics (2019)

  10. Article

    Open Access

    Association study in African-admixed populations across the Americas recapitulates asthma risk loci in non-African populations

    Asthma is a complex disease with striking disparities across racial and ethnic groups. Despite its relatively high burden, representation of individuals of African ancestry in asthma genome-wide association st...

    Michelle Daya, Nicholas Rafaels, Tonya M. Brunetti, Sameer Chavan in Nature Communications (2019)

  11. Article

    Author Correction: Assembly of a pan-genome from deep sequencing of 910 humans of African descent

    In the version of this article initially published, the statement “there are no pan-genomes for any other animal or plant species” was incorrect. The statement has been corrected to “there are no reported pan-...

    Rachel M. Sherman, Juliet Forman, Valentin Antonescu, Daniela Puiu in Nature Genetics (2019)

  12. Article

    Open Access

    Assembly of a pan-genome from deep sequencing of 910 humans of African descent

    We used a deeply sequenced dataset of 910 individuals, all of African descent, to construct a set of DNA sequences that is present in these individuals but missing from the reference human genome. We aligned 1...

    Rachel M. Sherman, Juliet Forman, Valentin Antonescu, Daniela Puiu in Nature Genetics (2019)

  13. Article

    Open Access

    The genetics of smoking in individuals with chronic obstructive pulmonary disease

    Smoking is the principal modifiable environmental risk factor for chronic obstructive pulmonary disease (COPD) which affects 300 million people and is the 3rd leading cause of death worldwide. Most of the gene...

    Ma’en Obeidat, Guohai Zhou, Xuan Li, Nadia N. Hansel in Respiratory Research (2018)

  14. Article

    Open Access

    A continuum of admixture in the Western Hemisphere revealed by the African Diaspora genome

    The African Diaspora in the Western Hemisphere represents one of the largest forced migrations in history and had a profound impact on genetic diversity in modern populations. To date, the fine-scale populatio...

    Rasika Ann Mathias, Margaret A. Taub, Christopher R. Gignoux in Nature Communications (2016)

  15. Article

    Open Access

    Ethnic-specific associations of rare and low-frequency DNA sequence variants with asthma

    Common variants at many loci have been robustly associated with asthma but explain little of the overall genetic risk. Here we investigate the role of rare (<1%) and low-frequency (1–5%) variants using the Ill...

    Catherine Igartua, Rachel A. Myers, Rasika A. Mathias in Nature Communications (2015)

  16. Article

    Open Access

    ITGB5 and AGFG1 variants are associated with severity of airway responsiveness

    Airway hyperresponsiveness (AHR), a primary characteristic of asthma, involves increased airway smooth muscle contractility in response to certain exposures. We sought to determine whether common genetic varia...

    Blanca E Himes, Weiliang Qiu, Barbara Klanderman, John Ziniti in BMC Medical Genetics (2013)

  17. No Access

    Article

    Genome-wide study identifies two loci associated with lung function decline in mild to moderate COPD

    Accelerated lung function decline is a key COPD phenotype; however, its genetic control remains largely unknown. We performed a genome-wide association study using the Illumina Human660W-Quad v.1_A BeadChip. G...

    Nadia N. Hansel, Ingo Ruczinski, Nicholas Rafaels, Don D. Sin in Human Genetics (2013)

  18. No Access

    Article

    Recombination rates in admixed individuals identified by ancestry-based inference

    John Novembre and colleagues present a new approach for constructing recombination maps based on ancestry switch points among individuals. They construct a high-resolution genome-wide recombination map based o...

    Daniel Wegmann, Darren E Kessner, Krishna R Veeramah, Rasika A Mathias in Nature Genetics (2011)

  19. No Access

    Article

    African ancestry is associated with risk of asthma and high total serum IgE in a population from the Caribbean Coast of Colombia

    African descended populations exhibit an increased prevalence of asthma and allergies compared to Europeans. One approach to distinguish between environmental and genetic explanations for this difference is to...

    Candelaria Vergara, Luis Caraballo, Dilia Mercado, Silvia Jimenez in Human Genetics (2009)