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  1. No Access

    Article

    Intestinal plasticity and metabolism as regulators of organismal energy homeostasis

    The small intestine displays marked anatomical and functional plasticity that includes adaptive alterations in adult gut morphology, enteroendocrine cell profile and their hormone secretion, as well as nutrien...

    Ozren Stojanović, Irene Miguel-Aliaga, Mirko Trajkovski in Nature Metabolism (2022)

  2. Article

    Open Access

    Critical Assessment of Metagenome Interpretation: the second round of challenges

    Evaluating metagenomic software is key for optimizing metagenome interpretation and focus of the Initiative for the Critical Assessment of Metagenome Interpretation (CAMI). The CAMI II challenge engaged the co...

    Fernando Meyer, Adrian Fritz, Zhi-Luo Deng, David Koslicki in Nature Methods (2022)

  3. Article

    Open Access

    Dietary excess regulates absorption and surface of gut epithelium through intestinal PPARα

    Intestinal surface changes in size and function, but what propels these alterations and what are their metabolic consequences is unknown. Here we report that the food amount is a positive determinant of the gu...

    Ozren Stojanović, Jordi Altirriba, Dorothée Rigo, Martina Spiljar in Nature Communications (2021)

  4. Article

    Open Access

    ATLAS: a Snakemake workflow for assembly, annotation, and genomic binning of metagenome sequence data

    Metagenomics studies provide valuable insight into the composition and function of microbial populations from diverse environments; however, the data processing pipelines that rely on map** reads to gene cat...

    Silas Kieser, Joseph Brown, Evgeny M. Zdobnov, Mirko Trajkovski in BMC Bioinformatics (2020)

  5. No Access

    Article

    Microbiota guides insulin trafficking in beta cells

    Ozren Stojanović, Mirko Trajkovski in Cell Research (2019)

  6. Article

    Open Access

    Hepatic protein tyrosine phosphatase receptor gamma links obesity-induced inflammation to insulin resistance

    Obesity-induced inflammation engenders insulin resistance and type 2 diabetes mellitus (T2DM) but the inflammatory effectors linking obesity to insulin resistance are incompletely understood. Here, we show tha...

    Xavier Brenachot, Giorgio Ramadori, Rafael M. Ioris in Nature Communications (2017)

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    Article

    Regulation of body weight and energy homeostasis by neuronal cell adhesion molecule 1

    The precise mechanisms that cause human obesity remain unknown. Here the authors illustrate how increased expression of Cadm1, a mediator of synapse assembly, is relevant to weight gain. Reduction of Cadm1 in ...

    Thomas Rathjen, **n Yan, Natalia L Kononenko, Min-Chi Ku, Kun Song in Nature Neuroscience (2017)

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    Article

    Microbial signals to the brain control weight

    The bacteria that inhabit the rodent gut promote insulin secretion and food intake by activating the parasympathetic nervous system — a hitherto unknown mode of action for this multifaceted microbiota. See Articl...

    Mirko Trajkovski, Claes B. Wollheim in Nature (2016)

  9. No Access

    Article

    Microbiota depletion promotes browning of white adipose tissue and reduces obesity

    Browning of white adipose tissue is induced by depletion of the microbiota, improving metabolic disease and reducing obesity.

    Nicolas Suárez-Zamorano, Salvatore Fabbiano, Claire Chevalier in Nature Medicine (2015)

  10. No Access

    Article

    MyomiR-133 regulates brown fat differentiation through Prdm16

    Brown adipose tissue generates heat on exposure to cold temperatures. Stoffel and colleagues identify a cold-regulated pathway that increases levels of the transcriptional regulator Prdm16 to promote brown adi...

    Mirko Trajkovski, Kashan Ahmed, Christine C. Esau, Markus Stoffel in Nature Cell Biology (2012)

  11. No Access

    Article

    MicroRNAs 103 and 107 regulate insulin sensitivity

    A microRNA (miRNA) microarray analysis of the livers of two mouse models of obesity show that the expression of miRNA-103 and miRNA-107 is upregulated in obesity. Silencing these miRNAs improves glucose homeos...

    Mirko Trajkovski, Jean Hausser, Jürgen Soutschek, Bal Bhat, Akinc Akin in Nature (2011)

  12. No Access

    Article

    Synergy of glucose and growth hormone signalling in islet cells through ICA512 and STAT5

    Nutrients and growth hormones promote insulin production and the proliferation of pancreatic β-cells. An imbalance between ever-increasing metabolic demands and insulin output causes diabetes. Recent evidence ...

    Hassan Mziaut, Mirko Trajkovski, Stephan Kersting, Armin Ehninger in Nature Cell Biology (2006)