6 Result(s)

Article

Chromosomal architecture changes upon cell differentiation

Maxim Imakaev, Geoffrey Fudenberg, Leonid Mirny in Epigenetics & Chromatin (2013)

Article

Polymer models of topological insulators

Boryana Doyle, Maxim Imakaev, Geoffrey Fudenberg, Leonid Mirny in Epigenetics & Chromatin (2013)

Article

S cerevisiae genome as a confined equilibrium polymer brush

Anton Goloborodko, Jon Matthew Belton, Geoffrey Fudenberg… in Epigenetics & Chromatin (2013)

Article

Polymer models of yeast S. cerevisiae genome organization

Geoff Fudenberg, Jon-Matthew Belton, Anton Goloborodko… in Epigenetics & Chromatin (2013)

Article

Genome-wide transcription start site map** of Bradyrhizobium japonicum grown free-living or in symbiosis – a rich resource to identify new transcripts, proteins and to study gene regulation

Differential RNA-sequencing (dRNA-seq) is indispensable for determination of primary transcriptomes. However, using dRNA-seq data to map transcriptional start sites (TSSs) and promoters genome-wide is a bioinf...

Jelena Čuklina, Julia Hahn, Maxim Imakaev, Ulrich Omasits… in BMC Genomics (2016)

Article

Lineage abundance estimation for SARS-CoV-2 in wastewater using transcriptome quantification techniques

Effectively monitoring the spread of SARS-CoV-2 mutants is essential to efforts to counter the ongoing pandemic. Predicting lineage abundance from wastewater, however, is technically challenging. We show that ...

Jasmijn A. Baaijens, Alessandro Zulli, Isabel M. Ott, Ioanna Nika… in Genome Biology (2022)