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  1. Article

    Open Access

    Generalizable transcriptome-based tumor malignant level evaluation and molecular subty** towards precision oncology

    In cancer treatment, therapeutic strategies that integrate tumor-specific characteristics (i.e., precision oncology) are widely implemented to provide clinical benefits for cancer patients. Here, through in-de...

    Dingxue Hu, Ziteng Zhang, **aoyi Liu, Youchun Wu in Journal of Translational Medicine (2024)

  2. Article

    Open Access

    Pathophysiology characterization of Alzheimer’s disease in South China’s aging population: for the Greater-Bay-Area Healthy Aging Brain Study (GHABS)

    The Guangdong-Hong Kong-Macao Greater-Bay-Area of South China has an 86 million population and faces a significant challenge of Alzheimer’s disease (AD). However, the characteristics and prevalence of AD in th...

    Zhen Liu, Dai Shi, Yue Cai, Anqi Li, Guoyu Lan, Pan Sun in Alzheimer's Research & Therapy (2024)

  3. No Access

    Article

    Retinal vessel segmentation method based on RSP-SA Unet network

    Segmenting retinal vessels plays a significant role in the diagnosis of fundus disorders. However, there are two problems in the retinal vessel segmentation methods. First, fine-grained features of fine blood ...

    Kun Sun, Yang Chen, Fuxuan Dong, Qing Wu in Medical & Biological Engineering & Computi… (2024)

  4. No Access

    Article

    RNA-Sequencing Reveals Gene Expression and Pathway Signatures in Umbilical Cord Blood Affected by Birth Delivery Mode

    Cesarean section (CS) confers increased risk of type I diabetes, asthma, inflammatory bowel disease, celiac disease, overweight and obesity, etc., in the offspring. However, the underlying mechanism remains un...

    Yongjie Liu, Kun Sun, Yuexin Gan, Han Liu, Juehua Yu, Wei Xu, Lin Zhang in Phenomics (2023)

  5. Article

    Open Access

    Initial levels of β-amyloid and tau deposition have distinct effects on longitudinal tau accumulation in Alzheimer’s disease

    To better assist with the design of future clinical trials for Alzheimer’s disease (AD) and aid in our understanding of the disease’s symptomatology, it is essential to clarify what roles β-amyloid (Aβ) plaque...

    Yue Cai, **g Du, Anqi Li, Yalin Zhu, Linsen Xu, Kun Sun in Alzheimer's Research & Therapy (2023)

  6. Article

    Open Access

    De novo disruptive heterozygous MMP21 variants are potential predisposing genetic risk factors in Chinese Han heterotaxy children

    Heterotaxy syndrome (HTX) is caused by aberrant left–right patterning early in embryonic development, which results in abnormal positioning and morphology of the thoracic and abdominal organs. Currently, genet...

    **-ji Qin, Meng-meng Xu, Jia-jun Ye, Yi-wei Niu, Yu-rong Wu, Rang Xu in Human Genomics (2022)

  7. Article

    Open Access

    Regulation of the p75 neurotrophin receptor attenuates neuroinflammation and stimulates hippocampal neurogenesis in experimental Streptococcus pneumoniae meningitis

    Streptococcus pneumoniae meningitis is a destructive central nervous system (CNS) infection with acute and long-term neurological disorders. Previous studies suggest that p75NTR signaling influences cell survival...

    Dandan Zhang, Shengnan Zhao, Zhijie Zhang, Danfeng Xu in Journal of Neuroinflammation (2021)

  8. Article

    Open Access

    Radiomics-based machine learning analysis and characterization of breast lesions with multiparametric diffusion-weighted MR

    This study aimed to evaluate the utility of radiomics-based machine learning analysis with multiparametric DWI and to compare the diagnostic performance of radiomics features and mean diffusion metrics in the ...

    Kun Sun, Zhicheng Jiao, Hong Zhu, Weimin Chai, Xu Yan in Journal of Translational Medicine (2021)

  9. Article

    Open Access

    Mutations in fibroblast growth factor (FGF8) and FGF10 identified in patients with conotruncal defects

    Conotruncal defects (CTDs) are a type of heterogeneous congenital heart diseases (CHDs), but little is known about their etiology. Increasing evidence has demonstrated that fibroblast growth factor (FGF) 8 and...

    Shuang Zhou, Qingjie Wang, Zhuo Meng, Jiayu Peng in Journal of Translational Medicine (2020)

  10. No Access

    Article

    MESP2 variants contribute to conotruncal heart defects by inhibiting cardiac neural crest cell proliferation

    Conotruncal heart defects (CTDs) are closely related to defective outflow tract (OFT) development, in which cardiac neural crest cells (CNCCs) play an indispensable role. However, the genetic etiology of CTDs ...

    Erge Zhang, Jian** Yang, Yang Liu, Nanchao Hong in Journal of Molecular Medicine (2020)

  11. Article

    Open Access

    Identification and analysis of KLF13 variants in patients with congenital heart disease

    The protein Kruppel-like factor 13 (KLF13) is a member of the KLF family and has been identified as a cardiac transcription factor that is involved in heart development. However, the relationship between KLF13...

    Wenjuan Li, Baolei Li, Tingting Li, Ergeng Zhang, Qingjie Wang in BMC Medical Genetics (2020)

  12. No Access

    Protocol

    Research Progress in Pathogenesis of Total Anomalous Pulmonary Venous Connection

    Congenital heart defect (CHD) is one of the most common birth defects and the leading course of infant mortality. Total anomalous pulmonary venous connection (TAPVC) is a rare type of cyanotic which accounting...

    **n Shi, Yanan Lu, Kun Sun in Precision Medicine (2020)

  13. Article

    Open Access

    A loss-of-function mutation p.T52S in RIPPLY3 is a potential predisposing genetic risk factor for Chinese Han conotruncal heart defect patients without the 22q11.2 deletion/duplication

    Conotruncal heart defect (CTD) is a complex congenital heart disease with a complex and poorly understood etiology. The transcriptional corepressor RIPPLY3 plays a pivotal role in heart development as a negati...

    Nanchao Hong, Erge Zhang, Qingjie Wang, **aoqing Zhang in Journal of Translational Medicine (2018)

  14. Article

    Open Access

    Identification of TBX2 and TBX3 variants in patients with conotruncal heart defects by target sequencing

    Conotruncal heart defects (CTDs) are heterogeneous congenital heart malformations that result from outflow tract dysplasia; however, the genetic determinants underlying CTDs remain unclear. Increasing evidence...

    Huilin **e, Erge Zhang, Nanchao Hong, Qihua Fu, Fen Li, Sun Chen, Yu Yu in Human Genomics (2018)

  15. Article

    Open Access

    Rare copy number variants analysis identifies novel candidate genes in heterotaxy syndrome patients with congenital heart defects

    Heterotaxy (Htx) syndrome comprises a class of congenital disorders resulting from malformations in left-right body patterning. Approximately 90% of patients with heterotaxy have serious congenital heart disea...

    Chunjie Liu, Ruixue Cao, Yuejuan Xu, Tingting Li, Fen Li, Sun Chen in Genome Medicine (2018)

  16. Article

    Open Access

    Zoledronate dysregulates fatty acid metabolism in renal tubular epithelial cells to induce nephrotoxicity

    Zoledronate is a bisphosphonate that is widely used in the treatment of metabolic bone diseases. However, zoledronate induces significant nephrotoxicity associated with acute tubular necrosis and renal fibrosi...

    Lili Cheng, Mengmeng Ge, Zhou Lan, Zhilong Ma, Wenna Chi in Archives of Toxicology (2018)

  17. Article

    Open Access

    FetalQuantSD: accurate quantification of fetal DNA fraction by shallow-depth sequencing of maternal plasma DNA

    Noninvasive prenatal testing using massively parallel sequencing of maternal plasma DNA has been rapidly adopted in clinical use worldwide. Fetal DNA fraction in a maternal plasma sample is an important parame...

    Peiyong Jiang, **anlu Peng, **aoxi Su, Kun Sun, Stephanie C Y Yu in npj Genomic Medicine (2016)

  18. Article

    Open Access

    Novel TBX1loss-of-function mutation causes isolated conotruncal heart defects in Chinese patients without 22q11.2 deletion

    TBX1 and CRKL haploinsufficiency is thought to cause the cardiac phenotype of the 22q11.2 deletion syndrome. However, few unequivocal mutations of TBX1 and CRKL have been discovered in isolated conotrucal heart d...

    Yue-Juan Xu, Sun Chen, Jian Zhang, Shao-Hai Fang, Qian-Qian Guo in BMC Medical Genetics (2014)

  19. Article

    Open Access

    Detecting 22q11.2 deletion in Chinese children with conotruncal heart defects and single nucleotide polymorphisms in the haploid TBX1 locus

    Conotruncal heart defects (CTDs) are present in 75-85% of patients suffering from the 22q11.2 deletion syndrome. To date, no consistent phenotype has been consistently correlated with the 22q11.2 deletions. Ge...

    Yue-Juan Xu, Jian Wang, Rang Xu, Peng-Jun Zhao, **-Ke Wang in BMC Medical Genetics (2011)

  20. No Access

    Article

    High Genetic Differentiation of Hippophae rhamnoides ssp. yunnanensis (Elaeagnaceae), a Plant Endemic to the Qinghai-Tibet Plateau

    RAPD markers were used to detect genetic diversity and population genetic differentiation of Hippophae rhamnoides ssp. yunnanensis, a sea buckthorn endemic to the Qinghai-Tibet plateau. The genetic parameters of ...

    Wen Chen, Xue Su, Hui Zhang, Kun Sun, Ruijun Ma, Xuelin Chen in Biochemical Genetics (2010)

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