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  1. Article

    Open Access

    Factor-specific generative pattern from large-scale drug-induced gene expression profile

    Drug discovery is a complex and interdisciplinary field that requires the identification of potential drug targets for specific diseases. In this study, we present FacPat, a novel approach that identifies the ...

    Se Hwan Ahn, Ju Han Kim in Scientific Reports (2023)

  2. Article

    Open Access

    Prognosis after discontinuing renin angiotensin aldosterone system inhibitor for heart failure with restored ejection fraction after acute myocardial infarction

    Prognostic effect of discontinuing renin–angiotensin–aldosterone-system-inhibitor (RAASi) for patients with heart failure (HF) after acute myocardial infarction (AMI) whose left ventricular (LV) systolic funct...

    Seung Hun Lee, Tae-Min Rhee, Doosup Shin, David Hong, Ki Hong Choi in Scientific Reports (2023)

  3. Article

    Open Access

    Author Correction: Heterogeneous genetic landscape of congenital neutropenia in Korean patients revealed by whole exome sequencing: genetic, phenotypic and histologic correlations

    Dajeong Jeong, Sung-Min Kim, Byung Joo Min, Ju Han Kim, Young Seok Ju in Scientific Reports (2022)

  4. Article

    Open Access

    Deep learning model to predict Epstein–Barr virus associated gastric cancer in histology

    The detection of Epstein–Barr virus (EBV) in gastric cancer patients is crucial for clinical decision making, as it is related with specific treatment responses and prognoses. Despite its importance, the limit...

    Yeo** Jeong, Cristina Eunbee Cho, Ji-Eon Kim, Jonghyun Lee in Scientific Reports (2022)

  5. Article

    Open Access

    Heterogeneous genetic landscape of congenital neutropenia in Korean patients revealed by whole exome sequencing: genetic, phenotypic and histologic correlations

    Congenital neutropenia (CN) is a hematological disease heterogeneous in its genetic, phenotypic and histologic aspects. We aimed to identify the genetic etiology of Korean CN patients in the context of bone ma...

    Dajeong Jeong, Sung-Min Kim, Byung Joo Min, Ju Han Kim, Young Seok Ju in Scientific Reports (2022)

  6. Article

    Open Access

    Preliminary feasibility assessment of CDM-based active surveillance using current status of medical device data in medical records and OMOP-CDM

    In recent years, there has been an emerging interest in the use of claims and electronic health record (EHR) data for evaluation of medical device safety and effectiveness. In Korea, national insurance electro...

    Sooin Choi, Soo Jeong Choi, ** Kuk Kim, Ki Chang Nam, Suehyun Lee in Scientific Reports (2021)

  7. Article

    Open Access

    Paired comparisons of mutational profiles before and after brachytherapy in asian uveal melanoma patients

    Uveal melanoma(UM) is the most common primary intraocular malignancy in adults. However, the incidence of UM in Asia is 10 to 20 times less than in Western populations. Therefore, for the first time, we report...

    Woo Seung Lee, Junwon Lee, Jun Jeong Choi, Hyun Goo Kang in Scientific Reports (2021)

  8. Article

    Open Access

    Interplay between IL6 and CRIM1 in thiopurine intolerance due to hematological toxicity in leukemic patients with wild-type NUDT15 and TPMT

    NUDT15 and TPMT variants are strong genetic determinants of thiopurine-induced hematological toxicity. Despite the impact of homozygous CRIM1 on thiopurine toxicity, several patients with wild-type NUDT15, TPMT, ...

    Hyery Kim, Seungwon You, Yoomi Park, Jung Yoon Choi, Youngeun Ma in Scientific Reports (2021)

  9. Article

    Open Access

    Classification of cervical neoplasms on colposcopic photography using deep learning

    Colposcopy is widely used to detect cervical cancers, but experienced physicians who are needed for an accurate diagnosis are lacking in develo** countries. Artificial intelligence (AI) has been recently use...

    Bum-Joo Cho, Youn ** Choi, Myung-Je Lee, Ju Han Kim, Ga-Hyun Son in Scientific Reports (2020)

  10. Article

    Open Access

    The major effects of health-related quality of life on 5-year survival prediction among lung cancer survivors: applications of machine learning

    The primary goal of this study was to evaluate the major roles of health-related quality of life (HRQOL) in a 5-year lung cancer survival prediction model using machine learning techniques (MLTs). The predicti...

    **-ah Sim, Young Ae Kim, Ju Han Kim, Jong Mog Lee, Moon Soo Kim in Scientific Reports (2020)

  11. Article

    Open Access

    Sex differences in the genetic architecture of depression

    The prevalence and clinical characteristics of depressive disorders differ between women and men; however, the genetic contribution to sex differences in depressive disorders has not been elucidated. To evalua...

    Hee-Ju Kang, Yoomi Park, Kyung-Hun Yoo, Ki-Tae Kim, Eun-Song Kim in Scientific Reports (2020)

  12. Article

    Open Access

    Clinical Genome Data Model (cGDM) provides Interactive Clinical Decision Support for Precision Medicine

    In light of recent developments in genomic technology and the rapid accumulation of genomic information, a major transition toward precision medicine is anticipated. However, the clinical applications of genom...

    Hyo Jung Kim, Hyeong Joon Kim, Yoomi Park, Woo Seung Lee in Scientific Reports (2020)

  13. Article

    Open Access

    Gene expression profiling of calcifications in breast cancer

    We investigated the gene expression profiles of calcifications in breast cancer. Gene expression analysis of surgical specimen was performed using Affymetrix GeneChip® Human Gene 2.0 ST arrays in 168 breast ca...

    Sung Ui Shin, Jeonghoon Lee, Ju Han Kim, Won Hwa Kim, Sung Eun Song in Scientific Reports (2017)

  14. Article

    Open Access

    Small molecule-based lineage switch of human adipose-derived stem cells into neural stem cells and functional GABAergic neurons

    Cellular reprogramming using small molecules (SMs) without genetic modification provides a promising strategy for generating target cells for cell-based therapy. Human adipose-derived stem cells (hADSCs) are a...

    Jihye Park, Nayeon Lee, Jaekwang Lee, Eun Kyung Choe, Min Kyung Kim in Scientific Reports (2017)

  15. Article

    Open Access

    Comparative analysis of metazoan chromatin organization

    A large collection of new modENCODE and ENCODE genome-wide chromatin data sets from cell lines and developmental stages in worm, fly and human are analysed; this reveals many conserved features of chromatin or...

    Joshua W. K. Ho, Youngsook L. Jung, Tao Liu, Burak H. Alver, Soohyun Lee in Nature (2014)