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    Article

    Prioritizing de novo autism risk variants with calibrated gene- and variant-scoring models

    Whole-exome and whole-genome sequencing studies in autism spectrum disorder (ASD) have identified hundreds of thousands of exonic variants. Only a handful of them, primarily loss-of-function variants, have bee...

    Yuxiang Jiang, Jorge Urresti, Kymberleigh A. Pagel, Akula Bala Pramod in Human Genetics (2022)

  2. Article

    Correction: Cortical organoids model early brain development disrupted by 16p11.2 copy number variants in autism

    Jorge Urresti, Pan Zhang, Patricia Moran-Losada, Nam-Kyung Yu in Molecular Psychiatry (2021)

  3. Article

    Open Access

    Cortical organoids model early brain development disrupted by 16p11.2 copy number variants in autism

    Reciprocal deletion and duplication of the 16p11.2 region is the most common copy number variation (CNV) associated with autism spectrum disorders. We generated cortical organoids from skin fibroblasts of pati...

    Jorge Urresti, Pan Zhang, Patricia Moran-Losada, Nam-Kyung Yu in Molecular Psychiatry (2021)

  4. Article

    Open Access

    Autism-linked Cullin3 germline haploinsufficiency impacts cytoskeletal dynamics and cortical neurogenesis through RhoA signaling

    E3-ubiquitin ligase Cullin3 (Cul3) is a high confidence risk gene for autism spectrum disorder (ASD) and developmental delay (DD). To investigate how Cul3 mutations impact brain development, we generated a haploi...

    Megha Amar, Akula Bala Pramod, Nam-Kyung Yu, Victor Munive Herrera in Molecular Psychiatry (2021)

  5. Article

    Open Access

    Inferring the molecular and phenotypic impact of amino acid variants with MutPred2

    Identifying pathogenic variants and underlying functional alterations is challenging. To this end, we introduce MutPred2, a tool that improves the prioritization of pathogenic amino acid substitutions over exi...

    Vikas Pejaver, Jorge Urresti, Jose Lugo-Martinez in Nature Communications (2020)

  6. No Access

    Protocol

    Comprehensive Analyses of Tissue-Specific Networks with Implications to Psychiatric Diseases

    Recent advances in genome sequencing and “omics” technologies are opening new opportunities for improving diagnosis and treatment of human diseases. The precision medicine initiative in particular aims at deve...

    Guan Ning Lin, Roser Corominas, Hyun-Jun Nam in Biological Networks and Pathway Analysis (2017)

  7. Article

    Open Access

    TNFα sensitizes neuroblastoma cells to FasL-, cisplatin- and etoposide-induced cell death by NF-κB-mediated expression of Fas

    Patients with high-risk neuroblastoma (NBL) tumors have a high mortality rate. Consequently, there is an urgent need for the development of new treatments for this condition. Targeting death receptor signaling...

    Koen MO Galenkamp, Paulina Carriba, Jorge Urresti in Molecular Cancer (2015)