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  1. Article

    Open Access

    Monovalent metal ion binding promotes the first transesterification reaction in the spliceosome

    Cleavage and formation of phosphodiester bonds in nucleic acids is accomplished by large cellular machineries composed of both protein and RNA. Long thought to rely on a two-metal-ion mechanism for catalysis, ...

    Jana Aupič, Jure Borišek, Sebastian M. Fica, Wojciech P. Galej in Nature Communications (2023)

  2. Article

    Open Access

    Coiled-coil heterodimers with increased stability for cellular regulation and sensing SARS-CoV-2 spike protein-mediated cell fusion

    Coiled-coil (CC) dimer-forming peptides are attractive designable modules for mediating protein association. Highly stable CCs are desired for biological activity regulation and assay. Here, we report the desi...

    Tjaša Plaper, Jana Aupič, Petra Dekleva, Fabio Lapenta in Scientific Reports (2021)

  3. Article

    Open Access

    Author Correction: Self-assembly and regulation of protein cages from pre-organised coiled-coil modules

    A Correction to this paper has been published: https://doi.org/10.1038/s41467-021-21969-9

    Fabio Lapenta, Jana Aupič, Marco Vezzoli, Žiga Strmšek in Nature Communications (2021)

  4. Article

    Open Access

    Self-assembly and regulation of protein cages from pre-organised coiled-coil modules

    Coiled-coil protein origami (CCPO) is a modular strategy for the de novo design of polypeptide nanostructures. CCPO folds are defined by the sequential order of concatenated orthogonal coiled-coil (CC) dimer-f...

    Fabio Lapenta, Jana Aupič, Marco Vezzoli, Žiga Strmšek in Nature Communications (2021)

  5. Article

    Open Access

    Designed folding pathway of modular coiled-coil-based proteins

    Natural proteins are characterised by a complex folding pathway defined uniquely for each fold. Designed coiled-coil protein origami (CCPO) cages are distinct from natural compact proteins, since their fold is...

    Jana Aupič, Žiga Strmšek, Fabio Lapenta, David Pahovnik in Nature Communications (2021)

  6. No Access

    Article

    A tunable orthogonal coiled-coil interaction toolbox for engineering mammalian cells

    Protein interactions guide most cellular processes. Orthogonal hetero-specific protein–protein interaction domains may facilitate better control of engineered biological systems. Here, we report a tunable de n...

    Tina Lebar, Duško Lainšček, Estera Merljak, Jana Aupič in Nature Chemical Biology (2020)

  7. No Access

    Article

    Design of coiled-coil protein-origami cages that self-assemble in vitro and in vivo

    Protein origami using coiled-coil building blocks produces self-assembling polyhedral cages for diverse applications.

    Ajasja Ljubetič, Fabio Lapenta, Helena Gradišar, Igor Drobnak in Nature Biotechnology (2017)