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  1. Article

    Open Access

    DBPP-Predictor: a novel strategy for prediction of chemical drug-likeness based on property profiles

    Evaluation of chemical drug-likeness is essential for the discovery of high-quality drug candidates while avoiding unwarranted biological and clinical trial costs. A high-quality drug candidate should have pro...

    Yaxin Gu, Yimeng Wang, Keyun Zhu, Weihua Li, Guixia Liu in Journal of Cheminformatics (2024)

  2. Article

    Open Access

    A seed expansion-based method to identify essential proteins by integrating protein–protein interaction sub-networks and multiple biological characteristics

    The identification of essential proteins is of great significance in biology and pathology. However, protein–protein interaction (PPI) data obtained through high-throughput technology include a high number of ...

    He Zhao, Guixia Liu, **ntian Cao in BMC Bioinformatics (2023)

  3. No Access

    Article

    Machine learning methods for predicting the key metabolic parameters of Halomonas elongata DSM 2581 T

    Ectoine is generally produced by the fermentation process of Halomonas elongata DSM 2581 T, which is one of the primary industrial ectoine production techniques. To effectively monitor and control the fermentatio...

    Guanxue Lai, Junxiong Yu, **g Wang, Weihua Li in Applied Microbiology and Biotechnology (2023)

  4. Article

    Open Access

    Differential subgenome expression underlies biomass accumulation in allotetraploid Pennisetum giganteum

    Pennisetum giganteum (AABB, 2n = 4x = 28) is a C4 plant in the genus Pennisetum with origin in Africa but currently also grown in Asia and America. It is a crucial forage and potential energy grass with significa...

    Longsheng **ng, Meijia Wang, Qiang He, Hongyu Zhang, Hanfei Liang in BMC Biology (2023)

  5. No Access

    Article

    Multi-label feature selection via redundancy of the selected feature set

    Due to the growing number of high-dimensional multi-label data which emerge in modern applications, multi-label feature selection becomes an important issue. Traditional multi-label feature selection algorithm...

    Haibo Zhong, ** Zhang, Guixia Liu in Applied Intelligence (2023)

  6. No Access

    Article

    SEN-FCB: an unsupervised twinning neural network for image registration

    Medical image registration is a fundamental and vital task in medical image analysis. Deformable medical image registration generates a dense nonlinear transformation from the moving image to the fixed image. ...

    Mingrui Ma, Guixia Liu, Lei Song, Yuanbo Xu in Applied Intelligence (2023)

  7. Article

    Open Access

    Chemical rules for optimization of chemical mutagenicity via matched molecular pairs analysis and machine learning methods

    Chemical mutagenicity is a serious issue that needs to be addressed in early drug discovery. Over a long period of time, medicinal chemists have manually summarized a series of empirical rules for the optimiza...

    Chaofeng Lou, Hongbin Yang, Hua Deng, Mengting Huang in Journal of Cheminformatics (2023)

  8. Article

    Open Access

    Isolation, bioassay and 3D-QSAR analysis of 8-isopentenyl flavonoids from Epimedium sagittatum maxim. as PDE5A inhibitors

    As known, inhibition of phosphodiesterase 5 (PDE5) has the therapeutic effect on male erectile dysfunction (ED), and the processed folium of Epimedium sagittatum Maxim. (PFES) characterized by 8-isopentenyl flavo...

    Juntao Li, Yue Wu, **nxin Yu, **nyu Zheng, Jiechen **an, Senjie Li in Chinese Medicine (2022)

  9. No Access

    Article

    TD-Net:unsupervised medical image registration network based on Transformer and CNN

    Medical image registration is a fundamental task in computer-aided medical diagnosis. Recently, researchers have begun to use deep learning methods based on convolutional neural networks (CNN) for registration...

    Lei Song, Guixia Liu, Mingrui Ma in Applied Intelligence (2022)

  10. No Access

    Article

    Green synthesis and luminescent properties of seven coordination K3ZrF7:Mn4+ red phosphor for warm WLEDs

    The seven-coordinated K3ZrF7:Mn4+ red phosphor was synthesized by green route. The structure, composition and morphology were characterized by X-ray diffraction, energy-dispersive X-ray spectrometer and scanning ...

    Hai** Xu, Feng Hong, Yunxiao Zhang in Journal of Materials Science: Materials in… (2022)

  11. Article

    Open Access

    In silico prediction of UGT-mediated metabolism in drug-like molecules via graph neural network

    UDP-glucuronosyltransferases (UGTs) have gained increasing attention as they play important roles in the phase II metabolism of drugs. Due to the time-consuming process and high cost of experimental approaches...

    Mengting Huang, Chaofeng Lou, Zengrui Wu, Weihua Li in Journal of Cheminformatics (2022)

  12. No Access

    Article

    Investigation of the mechanism of Shen Qi Wan prescription in the treatment of T2DM via network pharmacology and molecular docking

    Shen Qi Wan (SQW) prescription has been used to treat type 2 diabetes mellitus (T2DM) for thousands of years, but its pharmacological mechanism is still unclear. The network pharmacology method was used to rev...

    Piaopiao Zhao, **aoxiao Zhang, Yuning Gong, Weihua Li, Zengrui Wu in In Silico Pharmacology (2022)

  13. No Access

    Article

    Peculiar Sandwich-Typed Composite Membrane Endowed with Concurrent Tunable Electrically Conductive Anisotropism, Tailored Superparamagnetism, and Improved Green Luminescence

    The peculiar sandwich-typed composite membrane endowed with electrically conductive anisotropism, superparamagnetism and green luminescence is constructed via electrospun technology. The first layer is composed o...

    Liu Yang, Wensheng Yu, Jiao Tian, Haina Qi in Russian Journal of Physical Chemistry A (2022)

  14. Article

    Open Access

    A multitask GNN-based interpretable model for discovery of selective JAK inhibitors

    The Janus kinase (JAK) family plays a pivotal role in most cytokine-mediated inflammatory and autoimmune responses via JAK/STAT signaling, and administration of JAK inhibitors is a promising therapeutic strate...

    Yimeng Wang, Yaxin Gu, Chaofeng Lou, Yuning Gong, Zengrui Wu in Journal of Cheminformatics (2022)

  15. No Access

    Article

    Conjugative electrospinning towards Janus-type nanofibers array membrane concurrently displaying dual-functionality of improved red luminescence and tuneable superparamagnetism

    A [Eu(BA)3phen/polyvinyl pyrrolidone (PVP)]//[Fe3O4/PVP] Janus-type nanofibers array membrane (JNAM) concurrently displaying dual-functionality of improved red luminescence and tuneable superparamagnetism is succ...

    Haina Qi, Guoyi Wang, Qianli Ma, Dan Li in Journal of Materials Science: Materials in… (2022)

  16. Article

    Open Access

    Study on the diversity of epiphytic bacteria on corn and alfalfa using Illumina MiSeq/NovaSeq high-throughput sequencing system

    To investigate the diversity of the epiphytic bacteria on corn (Zea mays) and alfalfa (Medicago sativa) collected in Hengshui City and **ngtai City, Hebei Province, China, and explore crops suitable for natural s...

    Meixiao Wu, Yuehua Wang, Yi**g Wang, Xuefei Wang, Ming Yu in Annals of Microbiology (2021)

  17. Article

    Open Access

    Insights into the molecular mechanisms of Huangqi decoction on liver fibrosis via computational systems pharmacology approaches

    The traditional Chinese medicine Huangqi decoction (HQD) consists of Radix Astragali and Radix Glycyrrhizae in a ratio of 6: 1, which has been used for the treatment of liver fibrosis. In this study, we tried to ...

    Biting Wang, Zengrui Wu, Weihua Li, Guixia Liu, Yun Tang in Chinese Medicine (2021)

  18. No Access

    Article

    Magnetic Ganoderma Lucidum Spores (mGLS): A Novel Regulatable Targeted Drug Delivery System

    In the past decades, many materials have been studied as carriers for targeted drug delivery. However, there is a need for utilizable and selective carrier materials with few side effects. Here, the magnetic G...

    Bin Han, Zhankun Weng, Yuhan Wu, **n Zhao, **gmei Li in Journal of Bionic Engineering (2021)

  19. No Access

    Article

    Sandwich-shape composite film displaying conductive aeolotropy, magnetism and fluorescence and derived 3D tri-wall tube

    Novel two-dimensional (2D) sandwich-shape composite film (SSCF) with multi-function was successfully prepared by adopting electrospinning technology. The SSCF is composed of three layers. The first layer is do...

    Liu Yang, Qianli Ma, Haina Qi, Jiao Tian in The European Physical Journal Plus (2021)

  20. No Access

    Article

    Synthesis and Ethanol Sensing Properties of SnO2 Nanoparticles in SnO2 Nanotubes Composite

    Multidimensional nanostructures (0D–1D composite nanostructure) SnO2 nanoparticles in SnO2 nanotubes were easily synthesized by combining the co-precipitation method with the coaxial electrospinning method. SnO2 ...

    Feng Li, Qianli Ma, Wensheng Yu, **angting Dong in Russian Journal of Physical Chemistry A (2020)

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