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  1. No Access

    Article

    Joint genotypic and phenotypic outcome modeling improves base editing variant effect quantification

    CRISPR base editing screens enable analysis of disease-associated variants at scale; however, variable efficiency and precision confounds the assessment of variant-induced phenotypes. Here, we provide an integ...

    Jayoung Ryu, Sam Barkal, Tian Yu, Martin Jankowiak, Yunzhuo Zhou in Nature Genetics (2024)

  2. Article

    Author Correction: The power of genetic diversity in genome-wide association studies of lipids

    Sarah E. Graham, Shoa L. Clarke, Kuan-Han H. Wu, Stavroula Kanoni in Nature (2023)

  3. Article

    Open Access

    Major cell-types in multiomic single-nucleus datasets impact statistical modeling of links between regulatory sequences and target genes

    Epigenomic profiling, including ATACseq, is one of the main tools used to define enhancers. Because enhancers are overwhelmingly cell-type specific, inference of their activity is greatly limited in complex ti...

    Francis J. A. Leblanc, Guillaume Lettre in Scientific Reports (2023)

  4. Article

    Open Access

    Implicating genes, pleiotropy, and sexual dimorphism at blood lipid loci through multi-ancestry meta-analysis

    Genetic variants within nearly 1000 loci are known to contribute to modulation of blood lipid levels. However, the biological pathways underlying these associations are frequently unknown, limiting understandi...

    Stavroula Kanoni, Sarah E. Graham, Yuxuan Wang, Ida Surakka in Genome Biology (2022)

  5. Article

    Open Access

    A saturated map of common genetic variants associated with human height

    Common single-nucleotide polymorphisms (SNPs) are predicted to collectively explain 40–50% of phenotypic variation in human height, but identifying the specific variants and associated regions requires huge sa...

    Loïc Yengo, Sailaja Vedantam, Eirini Marouli, Julia Sidorenko, Eric Bartell in Nature (2022)

  6. No Access

    Article

    One step closer to linking GWAS SNPs with the right genes

    A new study highlights a strategy to link SNPs implicated in human complex traits and diseases with probable causal genes. This method prioritizes genes for functional characterization and helps address questi...

    Guillaume Lettre in Nature Genetics (2022)

  7. No Access

    Article

    The power of genetic diversity in genome-wide association studies of lipids

    Increased blood lipid levels are heritable risk factors of cardiovascular disease with varied prevalence worldwide owing to different dietary patterns and medication use1. Despite advances in prevention and treat...

    Sarah E. Graham, Shoa L. Clarke, Kuan-Han H. Wu, Stavroula Kanoni in Nature (2021)

  8. Article

    Open Access

    Correction to: Multi-ethnic genome-wide association analyses of white blood cell and platelet traits in the Population Architecture using Genomics and Epidemiology (PAGE) Study

    Yao Hu, Stephanie A. Bien, Katherine K. Nishimura, Jeffrey Haessler in BMC Genomics (2021)

  9. Article

    Open Access

    Multi-ethnic genome-wide association analyses of white blood cell and platelet traits in the Population Architecture using Genomics and Epidemiology (PAGE) study

    Circulating white blood cell and platelet traits are clinically linked to various disease outcomes and differ across individuals and ancestry groups. Genetic factors play an important role in determining these...

    Yao Hu, Stephanie A. Bien, Katherine K. Nishimura, Jeffrey Haessler in BMC Genomics (2021)

  10. No Access

    Article

    Shared genetic pathways contribute to risk of hypertrophic and dilated cardiomyopathies with opposite directions of effect

    The heart muscle diseases hypertrophic (HCM) and dilated (DCM) cardiomyopathies are leading causes of sudden death and heart failure in young, otherwise healthy, individuals. We conducted genome-wide associati...

    Rafik Tadros, Catherine Francis, **ao Xu, Alexa M. C. Vermeer in Nature Genetics (2021)

  11. Article

    Open Access

    Meta-analysis of up to 622,409 individuals identifies 40 novel smoking behaviour associated genetic loci

    Smoking is a major heritable and modifiable risk factor for many diseases, including cancer, common respiratory disorders and cardiovascular diseases. Fourteen genetic loci have previously been associated with...

    A. Mesut Erzurumluoglu, Mengzhen Liu, Victoria E. Jackson in Molecular Psychiatry (2020)

  12. Article

    Open Access

    Integrative analysis of vascular endothelial cell genomic features identifies AIDA as a coronary artery disease candidate gene

    Genome-wide association studies (GWAS) have identified hundreds of loci associated with coronary artery disease (CAD) and blood pressure (BP) or hypertension. Many of these loci are not linked to traditional r...

    Simon Lalonde, Valérie-Anne Codina-Fauteux, Sébastian Méric de Bellefon in Genome Biology (2019)

  13. Article

    Publisher Correction: Protein-altering variants associated with body mass index implicate pathways that control energy intake and expenditure in obesity

    An amendment to this paper has been published and can be accessed via a link at the top of the paper.

    Valérie Turcot, Yingchang Lu, Heather M. Highland, Claudia Schurmann in Nature Genetics (2019)

  14. No Access

    Article

    Protein-coding variants implicate novel genes related to lipid homeostasis contributing to body-fat distribution

    Body-fat distribution is a risk factor for adverse cardiovascular health consequences. We analyzed the association of body-fat distribution, assessed by waist-to-hip ratio adjusted for body mass index, with 22...

    Anne E. Justice, Tugce Karaderi, Heather M. Highland, Kristin L. Young in Nature Genetics (2019)

  15. Article

    Open Access

    PHACTR1 splicing isoforms and eQTLs in atherosclerosis-relevant human cells

    Genome-wide association studies (GWAS) have identified a variant (rs9349379) at the phosphatase and actin regulator 1 (PHACTR1) locus that is associated with coronary artery disease (CAD). The same variant is als...

    Valérie-Anne Codina-Fauteux, Mélissa Beaudoin, Simon Lalonde in BMC Medical Genetics (2018)

  16. Article

    Publisher Correction: Protein-altering variants associated with body mass index implicate pathways that control energy intake and expenditure in obesity

    In the version of this article originally published, one of the two authors with the name Wei Zhao was omitted from the author list and the affiliations for both authors were assigned to the single Wei Zhao in...

    Valérie Turcot, Yingchang Lu, Heather M. Highland, Claudia Schurmann in Nature Genetics (2018)

  17. Article

    Publisher Correction: Protein-altering variants associated with body mass index implicate pathways that control energy intake and expenditure in obesity

    In the published version of this paper, the name of author Emanuele Di Angelantonio was misspelled. This error has now been corrected in the HTML and PDF versions of the article.

    Valérie Turcot, Yingchang Lu, Heather M. Highland, Claudia Schurmann in Nature Genetics (2018)

  18. No Access

    Article

    Protein-altering variants associated with body mass index implicate pathways that control energy intake and expenditure in obesity

    Genome-wide association studies (GWAS) have identified >250 loci for body mass index (BMI), implicating pathways related to neuronal biology. Most GWAS loci represent clusters of common, noncoding variants fro...

    Valérie Turcot, Yingchang Lu, Heather M. Highland, Claudia Schurmann in Nature Genetics (2018)

  19. Article

    Open Access

    CNV-association meta-analysis in 191,161 European adults reveals new loci associated with anthropometric traits

    There are few examples of robust associations between rare copy number variants (CNVs) and complex continuous human traits. Here we present a large-scale CNV association meta-analysis on anthropometric traits ...

    Aurélien Macé, Marcus A. Tuke, Patrick Deelen, Kati Kristiansson in Nature Communications (2017)

  20. No Access

    Article

    The osteoarthritis and height GDF5 locus yields its secrets

    A new study reports molecular characterization of the GDF5 locus, which is associated with osteoarthritis risk and adult height in humans. This study provides evidence of positive selection for short stature at G...

    Guillaume Lettre in Nature Genetics (2017)

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