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Article
Open AccessFlux-dependent graphs for metabolic networks
Cells adapt their metabolic fluxes in response to changes in the environment. We present a framework for the systematic construction of flux-based graphs derived from organism-wide metabolic networks. Our grap...
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Article
Open AccessPFA toolbox: a MATLAB tool for Metabolic Flux Analysis
Metabolic Flux Analysis (MFA) is a methodology that has been successfully applied to estimate metabolic fluxes in living cells. However, traditional frameworks based on this approach have some limitations, par...
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Article
Open AccessTopology analysis and visualization of Potyvirus protein-protein interaction network
One of the central interests of Virology is the identification of host factors that contribute to virus infection. Despite tremendous efforts, the list of factors identified remains limited. With omics techniq...
