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  1. No Access

    Article

    A complex resistance locus in Solanum americanum recognizes a conserved Phytophthora effector

    Late blight caused by Phytophthora infestans greatly constrains potato production. Many Resistance (R) genes were cloned from wild Solanum species and/or introduced into potato cultivars by breeding. However, ind...

    Kamil Witek, **ao Lin, Hari S. Karki, Florian Jupe, Agnieszka I. Witek in Nature Plants (2021)

  2. Article

    Open Access

    Identification and rapid map** of a gene conferring broad-spectrum late blight resistance in the diploid potato species Solanum verrucosum through DNA capture technologies

    A broad-spectrum late blight disease-resistance gene from Solanum verrucosum has been mapped to potato chromosome 9. The gene is distinct from previously identified-resistance genes.

    **nwei Chen, Dominika Lewandowska, Miles R. Armstrong in Theoretical and Applied Genetics (2018)

  3. Article

    Open Access

    High contiguity Arabidopsis thaliana genome assembly with a single nanopore flow cell

    The handheld Oxford Nanopore MinION sequencer generates ultra-long reads with minimal cost and time requirements, which makes sequencing genomes at the bench feasible. Here, we sequence the gold standard Arabidop...

    Todd P. Michael, Florian Jupe, Felix Bemm, S. Timothy Motley in Nature Communications (2018)

  4. No Access

    Article

    Accelerated cloning of a potato late blight–resistance gene using RenSeq and SMRT sequencing

    A method for rapid cloning of plant disease-resistance genes could provide sustainable genetic solutions to crop pests and pathogens in place of agrichemicals.

    Kamil Witek, Florian Jupe, Agnieszka I Witek, David Baker in Nature Biotechnology (2016)

  5. Article

    Open Access

    Hypersensitive response to Potato virus Y in potato cultivar Sárpo Mira is conferred by the Ny-Smira gene located on the long arm of chromosome IX

    Potato virus Y (PVY, Potyvirus) is the fifth most important plant virus worldwide in terms of economic and scientific impact. It infects members of the family Solanaceae and causes losses in pota...

    Iga Tomczyńska, Florian Jupe, Ingo Hein, Waldemar Marczewski in Molecular Breeding (2014)

  6. Article

    Open Access

    Defining the full tomato NB-LRR resistance gene repertoire using genomic and cDNA RenSeq

    The availability of draft crop plant genomes allows the prediction of the full complement of genes that encode NB-LRR resistance gene homologs, enabling a more targeted breeding for disease resistance. Recentl...

    Giuseppe Andolfo, Florian Jupe, Kamil Witek, Graham J Etherington in BMC Plant Biology (2014)

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    Protocol

    Genomic DNA Library Preparation for Resistance Gene Enrichment and Sequencing (RenSeq) in Plants

    Enrichment of genomic DNA for genes of interest prior to high-throughput sequencing offers an efficient and cost-effective approach to reduce genome complexity. Target enrichment typically yields higher read-d...

    Florian Jupe, **nwei Chen, Walter Verweij, Kamel Witek in Plant-Pathogen Interactions (2014)

  8. Article

    Open Access

    Identification and localisation of the NB-LRR gene family within the potato genome

    The potato genome sequence derived from the Solanum tuberosum Group Phureja clone DM1-3 516 R44 provides unparalleled insight into the genome composition and organisation of this important crop. A key class of ge...

    Florian Jupe, Leighton Pritchard, Graham J Etherington, Katrin MacKenzie in BMC Genomics (2012)