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Article
Open AccessPower comparison of different methods to detect genetic effects and gene-environment interactions
Identifying gene-environment (G × E) interactions has become a crucial issue in the past decades. Different methods have been proposed to test for G × E interactions in the framework of linkage or association ...
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Article
Open AccessDealing with missing phase and missing data in phylogeny-based analysis
We recently described a new method to identify disease susceptibility loci, based on the analysis of the evolutionary relationships between haplotypes of cases and controls. However, haplotypes are often unkno...
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Article
Open AccessEfficiency of multiple imputation to test for association in the presence of missing data
The presence of missing data in association studies is an important problem, particularly with high-density single-nucleotide polymorphism (SNP) maps, because the probability that at least one genotype is miss...
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Article
Open AccessA mixture model approach to multiple testing for the genetic analysis of gene expression
With the availability of very dense genome-wide maps of markers, multiple testing has become a major difficulty for genetic studies. In this context, the false-discovery rate (FDR) and related criteria are wid...