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  1. Article

    Open Access

    A genomic basis of vocal rhythm in birds

    Vocal rhythm plays a fundamental role in sexual selection and species recognition in birds, but little is known of its genetic basis due to the confounding effect of vocal learning in model systems. Uncovering...

    Matteo Sebastianelli, Sifiso M. Lukhele, Simona Secomandi in Nature Communications (2024)

  2. No Access

    Article

    Transposons in the Williams–Beuren Syndrome Critical Region are Associated with Social Behavior in Assistance Dogs

    A strong signature of selection in the domestic dog genome is found in a five-megabase region of chromosome six in which four structural variants derived from transposons have previously been associated with h...

    Gitanjali E. Gnanadesikan, Dhriti Tandon, Emily E. Bray in Behavior Genetics (2024)

  3. Article

    Response to Hansen Wheat et al.: Additional analysis further supports the early emergence of cooperative communication in dogs compared to wolves raised with more human exposure

    Here, we address Hansen Wheat et al.’s commentary in this journal in response to Salomons et al. Current Biology, 31(14), 3137–3144.E11, (2021). We conduct additional analyses in response to Hansen Wheat et al.’s...

    Hannah Salomons, Kyle C. M. Smith, Megan Callahan-Beckel in Learning & Behavior (2023)

  4. Article

    Open Access

    Genetic diversity and family groups detected in a coyote population with red wolf ancestry on Galveston Island, Texas

    Hybridization can be a conservation concern if genomic introgression leads to the loss of an endangered species’ unique genome, or when hybrid offspring are sterile or less fit than their parental species. Yet...

    Tanner M. Barnes, Melissa Karlin, Bridgett M. vonHoldt in BMC Ecology and Evolution (2022)

  5. Article

    Open Access

    Global evaluation of taxonomic relationships and admixture within the Culex pipiens complex of mosquitoes

    Within the Culex pipiens mosquito complex, there are six contemporarily recognized taxa: Cx. quinquefasciatus, Cx. pipiens f. pipiens, Cx. pipiens f. molestus, Cx. pipiens pallens, Cx. australicus and Cx. globoco...

    Matthew L. Aardema, Bridgett M. vonHoldt, Megan L. Fritz in Parasites & Vectors (2020)

  6. Article

    Open Access

    Of microbes and mange: consistent changes in the skin microbiome of three canid species infected with Sarcoptes scabiei mites

    Sarcoptic mange is a highly contagious skin disease caused by the ectoparasitic mite Sarcoptes scabiei. Although it afflicts over 100 mammal species worldwide, sarcoptic mange remains a disease obscured by variab...

    Alexandra L. DeCandia, Kennedy N. Leverett, Bridgett M. vonHoldt in Parasites & Vectors (2019)

  7. No Access

    Article

    Natural re-colonization and admixture of wolves (Canis lupus) in the US Pacific Northwest: challenges for the protection and management of rare and endangered taxa

    Admixture resulting from natural dispersal processes can potentially generate novel phenotypic variation that may facilitate persistence in changing environments or result in the loss of population-specific ad...

    Sarah A. Hendricks, Rena M. Schweizer, Ryan J. Harrigan, John P. Pollinger in Heredity (2019)

  8. Article

    Open Access

    Growth factor gene IGF1 is associated with bill size in the black-bellied seedcracker Pyrenestes ostrinus

    Pyrenestes finches are unique among birds in showing a non-sex-determined polymorphism in bill size and are considered a textbook example of disruptive selection. Morphs breed randomly with respect to bill size, ...

    Bridgett M. vonHoldt, Rebecca Y. Kartzinel, Christian D. Huber in Nature Communications (2018)

  9. Article

    Open Access

    Galaxy tools to study genome diversity

    Intra-species genetic variation can be used to investigate population structure, selection, and gene flow in non-model vertebrates; and due to the plummeting costs for genome sequencing, it is now possible for...

    Oscar C Bedoya-Reina, Aakrosh Ratan, Richard Burhans, Hie Lim Kim in GigaScience (2013)

  10. No Access

    Article

    Identification of recent hybridization between gray wolves and domesticated dogs by SNP genoty**

    The ability to detect recent hybridization between dogs and wolves is important for conservation and legal actions, which often require accurate and rapid resolution of ancestry. The availability of a genetic ...

    Bridgett M. vonHoldt, John P. Pollinger, Dent A. Earl, Heidi G. Parker in Mammalian Genome (2013)

  11. No Access

    Article

    STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method

    We present STRUCTURE HARVESTER (available at http://taylor0.biology.ucla.edu/structureHarvester/), a web-based program for collating results generated by the...

    Dent A. Earl, Bridgett M. vonHoldt in Conservation Genetics Resources (2012)

  12. No Access

    Article

    Evolutionary genomics of dog domestication

    We review the underlying principles and tools used in genomic studies of domestic dogs aimed at understanding the genetic changes that have occurred during domestication. We show that there are two principle m...

    Robert K. Wayne, Bridgett M. vonHoldt in Mammalian Genome (2012)

  13. No Access

    Article

    Breed-specific ancestry studies and genome-wide association analysis highlight an association between the MYH9 gene and heat tolerance in Alaskan sprint racing sled dogs

    Alaskan sled dogs are a genetically distinct population shaped by generations of selective interbreeding with purebred dogs to create a group of high-performance athletes. As a result of selective breeding str...

    Heather J. Huson, Bridgett M. vonHoldt, Maud Rimbault in Mammalian Genome (2012)

  14. No Access

    Article

    Genome-wide SNP and haplotype analyses reveal a rich history underlying dog domestication

    The development of the domestic dog is a fascinating example of a dramatic radiation in form and function that has occurred rapidly in association with the expansion of human civilization. An extensive genome-...

    Bridgett M. vonHoldt, John P. Pollinger, Kirk E. Lohmueller, Eunjung Han in Nature (2010)